Query= MSMg01no416_c19.b1 MSMg01no416_c19.b1 CHROMAT_FILE:
MSMg01no416_c19.b1 PHD_FILE: MSMg01no416_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:44 2005
(604 letters)
>mm_chr11_64214315_64215320
Length = 1006
Score = 1106 bits (572), Expect = 0.0
Identities = 597/608 (98%), Gaps = 6/608 (0%)
Strand = Plus / Plus
Query: 1 gttcacttcagtggctttcttttttggtgggcctgagtgcagcaggttatgtgaacttcg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttcacttcagtggctttcttttttggtgggcctgagtgcagcaggttatgtgaacttca 260
Query: 61 accaaaccaatatgagccaagaagtacacatgaatattatggtagggagctaaatccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaaaccaatatgagccaagaagtacacatgaatattatggtagggagctaaatccagc 320
Query: 121 ttataacacagacaacatttacataacataaaggcagagagacacaggaga----ctcta 176
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 ttataatgcagacaacatttacataacataaaggcagagagacacaggagactctctcta 380
Query: 177 ctcagtgagatccttggaggcaagatttttttttattttattttgctcttggaagatttt 236
||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||
Sbjct: 381 ctcagtgagatccttggaggcaaga--tttttttgttttattttgcccttggaagatttt 438
Query: 237 cttgacagacataggtcatgttttaattactttatatttataatagtattagaaataata 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cttgacagacataggtcatgttttaattactttatatttataatagtattagaaataata 498
Query: 297 ctagcttaattggaaggtggtggttgtccaagggatctacttctgtttcagttcgcattc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctagcttaattggaaggtggtggttgtccaagggatctacttctgtttcagttcgcattc 558
Query: 357 cccttttattattgatggagagagcaagggacagataaataacttcagaagctgtcaggc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cccttttattattgatggagagagcaagggacagataaataacttcagaagctgtcaggc 618
Query: 417 gtttaatactgttactcttctgtggctcatttggccgaagtgcctataatattgatgaaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gtttaatactgttactcttctgtggctcatttggccgaagtgcctataatattgatgaaa 678
Query: 477 tggtaattctgttaatgacagcattgattccctcgaatatccagatttgttttccacact 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tggtaattctgttaatgacagcattgattccctcgaatatccagatttgttttccacact 738
Query: 537 gtcatcaagaaaattcccaggaagaaagacttatgatgcatttgctgatggcgcactgtc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gtcatcaagaaaattcccaggaagaaagacttatgatgcatttgctgatggcgcactgtc 798
Query: 597 cctcttgc 604
||||||||
Sbjct: 799 cctcttgc 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1006
Length adjustment: 10
Effective length of query: 594
Effective length of database: 996
Effective search space: 591624
Effective search space used: 591624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_c19.g1 MSMg01no416_c19.g1 CHROMAT_FILE:
MSMg01no416_c19.g1 PHD_FILE: MSMg01no416_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:44 2005
(420 letters)
>mm_chr11_64413900_64414718
Length = 819
Score = 760 bits (393), Expect = 0.0
Identities = 414/423 (97%), Gaps = 7/423 (1%)
Strand = Plus / Minus
Query: 1 acagttgaattgaatctgctgagctagaaagctgaaagcatatttgtcagctcctccccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 acagttgaattgaatctgctgagctagaaagctgaaagcatatttgtcagctcctccccc 560
Query: 61 agtgtcttcttctcactcaccaggacacggaggaacatgggtggctcaggatgtgggatt 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 559 agtgtcttcttctcactcaccaggacatggaggaacatgggtggctcaggatgtgggatt 500
Query: 121 gaacttttctttctcttcaccaagctccttggttccccagccctgtgaaccccaatgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gaacttttctttctcttcaccaagctccttggttccccagccctgtgaaccccaatgtac 440
Query: 181 tgctctcaccctttttttt--ccctctctattgttctgccctccactttgactgtgtgtc 238
|||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgctttcaccc---tttttccccctctctattgttctgccctccactttgactgtgtgtc 383
Query: 239 acatcccacattact-gttctgaatggcagaaagctaaccccacccgcctgcatctctat 297
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acatcccacatta-tagttctgaatggcagaaagctaaccccacccgcctgcatctctat 324
Query: 298 tcaatacaaagatttgctgttggcttcctgccaggaggccaggggtagcaggagggaagt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcaatacaaagatttgctgttggcttcctgccaggaggccaggggtagcaggagggaagt 264
Query: 358 cagtatctctgaggctgctaggataagctaccgcccagaccgcacacttgcctcagcact 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cagtatctctgaggctgctaggataagctaccgcccagaccgcacacttgcctcagcact 204
Query: 418 tcc 420
|||
Sbjct: 203 tcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 819
Length adjustment: 9
Effective length of query: 411
Effective length of database: 810
Effective search space: 332910
Effective search space used: 332910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
