NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACAACTTACGAATCTCGAATGGCTAAAGAAGCACCTAAAGAAAT
GTTCAAAGTCCTTAGTGATCAGAGGAATGCAAATCAAAATGACCCTGAAA
TCCCACCTTACACCATTCAGAATGGCTAAGACCAAAACCTCAGGTGACAA
CATATGTTGGTGAGGATGTGGAGAAAGAGGGACACTCCTCCATTGATGAT
GGGATTGCAAACTGGTCCAACCCCTCTGGAAATCAATCTGGAGTTCCTTA
GAAAATTGGAAATAGATCTACTTGTAGACCTAGCAATACCACTTTTGGGA
TTATTCTCAAAAGATGCACCATCATGCCACAGGGGCATGTGTTCCACTGT
GTTCATAGTGTCCTTGTTTGTGATAGCCAGAAGCTGGAAACAACCCAGAT
GTCCCACGACAGAAGAATGGATACAGGAAATGTTGTTCATTTACACAATG
GGATACTACTCAGTTATTAAGAATGAGGACATCCTGAATTGTGCAGGCAA
GTGGATGGAACTAGAAAATATCATCCTGAGTGACGTAACTCAGACCCAAA
AGGACATGCATGGTATGTACTCACTAATAAGTGGATATTAGCCAAAAAAA
GAGTACAGCATATCTAAGATACAGTCCACAGAACTCTAAAAGCTCAACAA
GCTGAAGTGCCCAAGTGAGGACACTTTAGTCTCACTTGTGAA

NNNCCGATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTAACAACATCATTAAATGT
GAGCATCCTGCCTTGATGAGGAGATTTAAAACTATAAATTGTTTATACAT
TGTGCTTTCACTATGGGCATTTGAACTCTCCCCTGACAATACAGTTAATA
AGGAGACGAGAGGAGCCCAAGATGCCAGAGCAATTAGTAACAGAACCCAG
GGGCTTTCATCACTCTCTCATTGTTTGGAACCTAGCCTAGATCAACAGTG
ACTAAGAATCATAACTTCCACTTCATTCTAAGCAGTTGCCTGACCCTTTT
GCCTGAAGAAAAGTATTCAATCTAAAGAGCTGCCTGCTAAGGTGGCACTG
CGAAGAGAGCCCTCAGTGCTACAGAAAGAAAGCCCAACCCTGACTTTCCT
CATGCTCTAAGCAAAAGTGCATATATGAAGAGAAGAAACAAAGAACTGAG
AATTGTAGAAAGACAGGAGACTTCCAGTACACATCCTGTCATTGAGCTTC
AAGCTTTCACACAAGTGCAGATATGCTTTTATTAAGAGTGGTAAACCATG
CTATAGTTACCAAGAAAATTAGTTGAACCTCAAGAGCCATTTTGAATTCA
GTGCCCTAGTGAGAAAATCCAAGCATTGTATTCTCCCTAAAGAACAGCCT
AGAAGTGGCTCGAAGTCAGAAGCTTCTTTCTCATAAA

Query= MSMg01no417_k15.g1 MSMg01no417_k15.g1 CHROMAT_FILE:
MSMg01no417_k15.g1 PHD_FILE: MSMg01no417_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:37 2005
         (507 letters)



>mm_chr11_28733569_28734475
          Length = 907

 Score =  965 bits (499), Expect = 0.0
 Identities = 505/507 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attaacaacatcattaaatgtgagcatcctgccttgatgaggagatttaaaactataaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaacaacatcattaaatgtgagcatcctgccttgatgaggagatttaaaactataaat 260

                                                                       
Query: 61  tgtttatacattgtgctttcactatgggcatttgaactctcccctgacaatacagttaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtttatacattgtgctttcactatgggcatttgaactctcccctgacaatacagttaat 320

                                                                       
Query: 121 aaggagacgagaggagcccaagatgccagagcaattagtaacagaacccaggggctttca 180
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggagacgagaggagcctaagatgccagagcaattagtaacagaacccaggggctttca 380

                                                                       
Query: 181 tcactctctcattgtttggaacctagcctagatcaacagtgactaagaatcataacttcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcactctctcattgtttggaacctagcctagatcaacagtgactaagaatcataacttcc 440

                                                                       
Query: 241 acttcattctaagcagttgcctgacccttttgcctgaagaaaagtattcaatctaaagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttcattctaagcagttgcctgacccttttgcctgaagaaaagtattcaatctaaagag 500

                                                                       
Query: 301 ctgcctgctaaggtggcactgcgaagagagccctcagtgctacagaaagaaagcccaacc 360
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgcctgctaaggtggcacggcgaagagagccctcagtgctacagaaagaaagcccaacc 560

                                                                       
Query: 361 ctgactttcctcatgctctaagcaaaagtgcatatatgaagagaagaaacaaagaactga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgactttcctcatgctctaagcaaaagtgcatatatgaagagaagaaacaaagaactga 620

                                                                       
Query: 421 gaattgtagaaagacaggagacttccagtacacatcctgtcattgagcttcaagctttca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaattgtagaaagacaggagacttccagtacacatcctgtcattgagcttcaagctttca 680

                                      
Query: 481 cacaagtgcagatatgcttttattaag 507
           |||||||||||||||||||||||||||
Sbjct: 681 cacaagtgcagatatgcttttattaag 707


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space:   445809
Effective search space used:   445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)