Query= MSMg01no419_a24.b1 MSMg01no419_a24.b1 CHROMAT_FILE:
MSMg01no419_a24.b1 PHD_FILE: MSMg01no419_a24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:27 2005
(370 letters)
>mm_chr11_54620890_54621659
Length = 770
Score = 677 bits (350), Expect = 0.0
Identities = 365/370 (98%)
Strand = Plus / Plus
Query: 1 cctctgcctgctaaatgctgggattataggtgtgtgccaccaggccaggctttaggctta 60
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 201 cctctgcctgctaaatgctgggattataagtgtgtgtcaccaggccaggctttaggctta 260
Query: 61 tctaaaacatactttgacagctttaaaggctcatcaggaaatagcactgagctcataaaa 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaaaacatagtttgacagctttaaaggctcatcaggaaatagcactgagctcataaaa 320
Query: 121 agtagttacagtcacactaatttcagatgaagagttatggcagcgagcgttcaacatggc 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 agtagttacagtcacactaatttcagacgaagagttatggcagcgagcgttcaacatggc 380
Query: 181 gatgtggggcacttcctactgaggacggtggttacagaagggttgaatgcaaaggggaat 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgtggggcacttcctactgaggatggtggttacagaagggttgaatgcaaaggggaat 440
Query: 241 atgtctggtagcctggcacacggcctcaccacagtcttcattacataagcaataacaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtctggtagcctggcacacggcctcaccacagtcttcattacataagcaataacaacc 500
Query: 301 ggcccccacatccttgttcacacccagatgagttaaagtgaaagaggaaccatcatagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcccccacatccttgttcacacccagatgagttaaagtgaaagaggaaccatcatagca 560
Query: 361 tctagataaa 370
||||||||||
Sbjct: 561 tctagataaa 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_a24.g1 MSMg01no419_a24.g1 CHROMAT_FILE:
MSMg01no419_a24.g1 PHD_FILE: MSMg01no419_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:27 2005
(198 letters)
>mm_chr11_54788945_54789541
Length = 597
Score = 327 bits (169), Expect = 3e-94
Identities = 190/197 (96%), Gaps = 1/197 (0%)
Strand = Plus / Minus
Query: 1 agtcctgctggagaatctttacctgagctgccattgctttctttgcaggactcacctgtt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 396 agtcctgctggagaatctttacctgagccgccattgctttctttgcaggactcacctatt 337
Query: 61 acatacagtaagacaactgaaataaagttctgattggtaggatggcttgcctgaagactg 120
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 336 gcatacagtaagacaactgaaataaggttctgattggtaggatggcttgcctgaagactg 277
Query: 121 catcatagcttgtacttctggagaagacttcctcatttcacatggagggaggctacaggg 180
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 catcatagc-aggacttctggagaagacttcctcatttcacatggagggaggctacaggg 218
Query: 181 aaattctagctatacca 197
|||||||||||||||||
Sbjct: 217 aaattctagctatacca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 597
Length adjustment: 8
Effective length of query: 190
Effective length of database: 589
Effective search space: 111910
Effective search space used: 111910
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
