Query= MSMg01no419_b04.b1 MSMg01no419_b04.b1 CHROMAT_FILE:
MSMg01no419_b04.b1 PHD_FILE: MSMg01no419_b04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:27 2005
(378 letters)
>mm_chr11_36480954_36481732
Length = 779
Score = 688 bits (356), Expect = 0.0
Identities = 368/372 (98%), Gaps = 1/372 (0%)
Strand = Plus / Plus
Query: 8 gaattctccaactttcaaacttgctaggcacgttcagcaatgcagcaatacactgtgctg 67
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattctccaacagtcaaacttgctaggcacgttcagcaatgcagcaatacactgtgctg 267
Query: 68 ttctcaagtttaggctcacagagaaaacaaatcacacactcctaataccctgtccaactt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttctcaagtttaggctcacagagaaaacaaatcacacactcctaataccctgtccaactt 327
Query: 128 ttagttcacaagaacagacaaagacgtagcatatgaaccgtccaatcattcatttgtcaa 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttagttcacaagaacagacaaagacgtagcatatgaaccgtccaatcattcatttgtcaa 387
Query: 188 atcaaggggactgacacggcagctcgagtagaaacagtatttggggtgtaaccatcaatg 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atcaaggggactgacacggcagctcgagtagaaacagtatttggggtgtaaccatcaatg 447
Query: 248 tttaaaaacaatttacccttctgttctagtaacatttttttttttaaaa-gttaagacaa 306
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 448 tttaaaaacaatttacccttctgttctagtaacatttttttttttaaaaagttaagacaa 507
Query: 307 gtgattcacagcctgttataatgaggcataataaagtaattagagcttgagtttccatca 366
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gtgattcacagtctgttataatgaggcataataaagtaattagagcttgagtttccatca 567
Query: 367 aggttcttgcca 378
||||||||||||
Sbjct: 568 aggttcttgcca 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 779
Length adjustment: 9
Effective length of query: 369
Effective length of database: 770
Effective search space: 284130
Effective search space used: 284130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_b04.g1 MSMg01no419_b04.g1 CHROMAT_FILE:
MSMg01no419_b04.g1 PHD_FILE: MSMg01no419_b04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:28 2005
(518 letters)
>mm_chr11_36616941_36617858
Length = 918
Score = 994 bits (514), Expect = 0.0
Identities = 517/518 (99%)
Strand = Plus / Minus
Query: 1 cacactcctgtccatttccagggagtgatcactatcaggaatctacctccatttcctata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 cacactcctgtccatttccagggagtgatcactatcaggaatctacctccatttcctata 659
Query: 61 ggcactttacctggattttctttgcctcgatattgtgacattcttcaaatatgtaaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ggcactttacctggattttctttgcctcgatattgtgacattcttcaaatatgtaaatgt 599
Query: 121 tatgcagttaatatcctatttcaaaaagataactcctgtttaatgtctaatcttggtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tatgcagttaatatcctatttcaaaaagataactcctgtttaatgtctaatcttggtcac 539
Query: 181 atagctagcatgcttatttctcacttacctcataaattgttttatacacaaacatagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 atagctagcatgcttatttctcacttacctcataaattgttttatacacaaacatagctg 479
Query: 241 catgtacatatacttactggagattagatacagtagacttagacacagtgagtggatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 catgtacatatacttactggagattagatacagtagacttagacacagtgagtggatttt 419
Query: 301 aaaatctttttttttaacctaagactaaagcatcatatgtgtaactaagtaaactgcaga 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 agaatctttttttttaacctaagactaaagcatcatatgtgtaactaagtaaactgcaga 359
Query: 361 aacccctcagtaaactccattcattctctactgtacaaagtgagaacagcaaattctaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aacccctcagtaaactccattcattctctactgtacaaagtgagaacagcaaattctaag 299
Query: 421 gggtgtgttacagtgtggattaaacagagaaatgtgtgtaaaaatcaaggtattccaagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gggtgtgttacagtgtggattaaacagagaaatgtgtgtaaaaatcaaggtattccaagc 239
Query: 481 gcagactcatcctagatgtctgtcagtgtatgaagaga 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gcagactcatcctagatgtctgtcagtgtatgaagaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
