MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-419J05
Chromosome	11 (Build37)
Map Location	42,740,864 - 42,741,340
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gabrg2, Gabra1, Gabra6, Gabrb2
Downstream gene	Atp10b, EG544767, Pttg1, Slu7, LOC100039392, C1qtnf2, Ccnjl, Fabp6, LOC620562, 4631424J17Rik, Ttc1, Adra1b
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gabrg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14406 MGI:95623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gabra1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14394 MGI:95613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gabra6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14399 MGI:95618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gabrb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14401 MGI:95620
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp10b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319767 MGI:2442688
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG544767 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544767 MGI:3646984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Pttg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30939 MGI:1353578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slu7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:193116 MGI:2385598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039392 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	C1qtnf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69183 MGI:1916433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccnjl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380694 MGI:2685723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fabp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16204 MGI:96565
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620562 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620562
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	4631424J17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70802 MGI:1918052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 67 ESTs, 2 Proteins

name	Ttc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66827 MGI:1914077
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adra1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11548 MGI:104774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gabrg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366118 GeneID:14406 MGI:95623
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 transcript_id : NM_177408.4

name	Gabrg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131010 GeneID:14406 MGI:95623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 transcript_id : NM_008073.2

name	Gabra1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386622 GeneID:14394 MGI:95613
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1 transcript_id : NM_010250.3

name	Gabra6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679904 GeneID:14399 MGI:95618
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6 transcript_id : NM_008068.1

name	Gabrb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124301234 GeneID:14401 MGI:95620
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 transcript_id : NM_008070.3

name	Atp10b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125628643 GeneID:319767 MGI:2442688
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, Class V, type 10B transcript_id : NM_176999.3

name	EG544767 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390054 GeneID:544767 MGI:3646984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG544767 transcript_id : XM_622131.3

name	Pttg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305426 GeneID:30939 MGI:1353578
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pituitary tumor-transforming 1 transcript_id : NM_013917.1

name	Slu7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39812155 GeneID:193116 MGI:2385598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLU7 splicing factor homolog (S. cerevisiae) transcript_id : NM_148673.3

name	Slu7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39812172 GeneID:193116 MGI:2385598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLU7 splicing factor homolog (S. cerevisiae) transcript_id : NM_198936.1

name	C1qtnf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801860 GeneID:69183 MGI:1916433
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1q and tumor necrosis factor related protein 2 transcript_id : NM_026979.2

name	Ccnjl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865890 GeneID:380694 MGI:2685723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin J-like transcript_id : NM_001045530.1

name	Fabp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680440 GeneID:16204 MGI:96565
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fatty acid binding protein 6, ileal (gastrotropin) transcript_id : NM_008375.1

name	4631424J17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261857 GeneID:70802 MGI:1918052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 67 ESTs, 2 Proteins product : RIKEN cDNA 4631424J17 gene, transcript variant 1 transcript_id : XM_282969.7

name	Ttc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20452461 GeneID:66827 MGI:1914077
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 1 transcript_id : NM_133795.1

name	Adra1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803355 GeneID:11548 MGI:104774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adrenergic receptor, alpha 1b transcript_id : NM_007416.3

name	Gabrg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679915 CCDS:CCDS24551.1 GeneID:14406 MGI:95623
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0004890 - GABA-A receptor activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0007214 - gamma-aminobutyric acid signaling pathway [Evidence IDA]; GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 isoform 1 protein_id : NP_032099.1

name	Gabrg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83921591 CCDS:CCDS24552.1 GeneID:14406 MGI:95623
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0004890 - GABA-A receptor activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0007214 - gamma-aminobutyric acid signaling pathway [Evidence IDA]; GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 isoform 2 protein_id : NP_803127.2

name	Gabra1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753936 CCDS:CCDS24553.1 GeneID:14394 MGI:95613
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0004890 - GABA-A receptor activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0007214 - gamma-aminobutyric acid signaling pathway [Evidence IEA] codon_start : 1 note : GABAA alpha 1 product : gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1 protein_id : NP_034380.1

name	Gabra6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679905 CCDS:CCDS24554.1 GeneID:14399 MGI:95618
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0004890 - GABA-A receptor activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0007214 - gamma-aminobutyric acid signaling pathway [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : gamma-aminobutyric acid A recptor, subunit alpha 6; subunit alpha 6 gamma-aminobutyric acid (GABA-A) receptor product : gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6 protein_id : NP_032094.1

name	Gabrb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679909 CCDS:CCDS24555.1 GeneID:14401 MGI:95620
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0004890 - GABA-A receptor activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0007214 - gamma-aminobutyric acid signaling pathway [Evidence IEA] codon_start : 1 note : gamma-aminobutyric acid receptor beta-2 subunit; subunit beta 2 gamma-aminobutyric acid (GABA-A) receptor product : gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 protein_id : NP_032096.1

name	Atp10b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125628644 GeneID:319767 MGI:2442688
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA] codon_start : 1 note : potential phospholipid-transporting ATPase VB product : ATPase, Class V, type 10B protein_id : NP_795973.2

name	EG544767 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63621847 GeneID:544767 MGI:3646984
definition	codon_start : 1 product : hypothetical protein protein_id : XP_622131.1

name	Pttg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305427 CCDS:CCDS24556.1 GeneID:30939 MGI:1353578
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0050875 - cellular physiological process [Evidence ISS]; GO:0051276 - chromosome organization and biogenesis [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]; GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0045143 - homologous chromosome segregation [Evidence IDA]; GO:0007067 - mitosis [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : pituitary tumor-transforming 1 protein_id : NP_038945.1

name	Slu7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27477103 CCDS:CCDS24557.1 GeneID:193116 MGI:2385598
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : step II splicing factor SLU7 protein_id : NP_683514.2

name	Slu7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39812173 CCDS:CCDS24557.1 GeneID:193116 MGI:2385598
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : step II splicing factor SLU7 protein_id : NP_945174.1

name	C1qtnf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037153 CCDS:CCDS24558.1 GeneID:69183 MGI:1916433
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005102 - receptor binding [Evidence IDA] GO_process : GO:0000187 - activation of MAPK activity [Evidence IDA]; GO:0006817 - phosphate transport [Evidence IEA]; GO:0046321 - positive regulation of fatty acid oxidation [Evidence IDA]; GO:0046326 - positive regulation of glucose import [Evidence IDA]; GO:0045725 - positive regulation of glycogen biosynthesis [Evidence IDA]; GO:0051260 - protein homooligomerization [Evidence IDA] codon_start : 1 product : C1q and tumor necrosis factor related protein 2 protein_id : NP_081255.1

name	Ccnjl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865891 CCDS:CCDS24559.1 GeneID:380694 MGI:2685723
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : cyclin J-like protein_id : NP_001038995.1

name	Fabp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680441 CCDS:CCDS24560.1 GeneID:16204 MGI:96565
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0008206 - bile acid metabolism [Evidence TAS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ileal lipid binding protein product : fatty acid binding protein 6, ileal (gastrotropin) protein_id : NP_032401.1

name	4631424J17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63621857 GeneID:70802 MGI:1918052
definition	codon_start : 1 product : hypothetical protein LOC70802 isoform 1 protein_id : XP_282969.4

name	Ttc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20452462 CCDS:CCDS24561.1 GeneID:66827 MGI:1914077
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : tetratricopeptide repeat domain 1 protein_id : NP_598556.1

name	Adra1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66792804 CCDS:CCDS24562.1 GeneID:11548 MGI:104774
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0000299 - integral to membrane of membrane fraction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004937 - alpha1-adrenergic receptor activity [Evidence IDA] [Evidence IMP] [Evidence IGI]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007512 - adult heart development [Evidence IGI]; GO:0048148 - behavioral response to cocaine [Evidence IMP]; GO:0001974 - blood vessel remodeling [Evidence IMP]; GO:0016049 - cell growth [Evidence IGI]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0042593 - glucose homeostasis [Evidence IMP]; GO:0001997 - increased strength of heart contraction by epinephrine-norepinephrine [Evidence IGI]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0045818 - negative regulation of glycogen catabolism [Evidence IMP]; GO:0035265 - organ growth [Evidence IGI]; GO:0045819 - positive regulation of glycogen catabolism [Evidence IMP]; GO:0001996 - positive regulation of heart contraction rate by epinephrine-norepinephrine [Evidence IGI]; GO:0001975 - response to amphetamine [Evidence IMP]; GO:0043278 - response to morphine [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0001987 - vasoconstriction of artery during baroreceptor response to lowering of blood pressure [Evidence IMP]; GO:0008542 - visual learning [Evidence IMP] codon_start : 1 note : alpha1B-adrenergic receptor product : adrenergic receptor, alpha 1b protein_id : NP_031442.2

name	LOC100039392 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039392
definition	number : 1 pseudo : _no_value

name	LOC620562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620562
definition	number : 1 pseudo : _no_value

name	LOC620562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620562
definition	number : 2 pseudo : _no_value

name	LOC620562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620562
definition	number : 3 pseudo : _no_value

clone name	MSMg01-404B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059M06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-462I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161G22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-194A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-419J05.T7 (MSMg01no419_j05.b1)	MSMg01-419J05.TJ (MSMg01no419_j05.g1)
ACC	AG514645	AG514646
length	769	744
length of high quality (start - end)	370 (77 - 446)	477 (72 - 548)
definition	CHROMAT_FILE: MSMg01no419_j05.b1 PHD_FILE: MSMg01no419_j05.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:39:10 2005	CHROMAT_FILE: MSMg01no419_j05.g1 PHD_FILE: MSMg01no419_j05.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:39:10 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CCCCCTTTTCAAAAATTGCGGCCGCTAATAGATCACTATTTTCCAAGGAC CGCGGAANNCNCAACTTACCAATAAGAATGACTGAGAAGCATCTAAAAAA ATGTTCAACATCCTTAATCATCGGGGAAATGCAAATCAAAACAACCCTGA GATTCTACCTCAGGCCAATCAGAATGGCTAAGATCAAAAACTCAGGTGAC AGCAAATGCTGTTGAGGATGTGGAGGAAGAGGAACACTTCTGCATTGCTG GTGGGATTGCAATCTTGTACAACCACTCTGGAAATTAGTCTCGCATTTCT TCAGAAAATTGGACATAGTACTACCAGAGGATCCACCAATACCACTCCTG GGCATATACCTACCCAGAAGATGTTCCAACATTTAATAAGGACACAAGCT CCACTTTGTTCATAGCAGCCCTATGTATAATAGCCAGAAGCTGGAAAGAA CCCAGATGTCCCTCANCAGAGGAATGGATACAGAAATTGTATGCACTTTC ATGGCACATCATTTGCTCTGGAAAAAAGTAATATTTGAACAACCATGGAC TTTCTTATTTTCTTATATCAATATTTAAAAGCAAAAAAAACATTGTTTCT GAAACCGCGGCTGGGAGAAATGCATTGGGGGTTTTTCTCTTTTAAAAAAA AAACCCCCCAAAGCCGTGGGGGGTTCCCCCTCTAAAACCAAATACCCTTG GAGGTGGCGCCCCTCTCCCTCGGCGCAAATACAAGGTCCCCTCCGTTATT CCCCCTCTCACCCCAATTC	ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXAGAGAATTGACTGATTCATTTCACTTTTA TCTATCCCTCTCCCTAACACACACAAATTTTAGATGGAAACAGCTAATTG CCACTGTCTTTGACTAAATGATATTGAATGACACTATTTTAAAAACCCCA CTACCATCTCCTGACTCAACCTGTCGCTTTATCTTTAGTAGTTTGAGAAC TTTTTGAAATTGGGTGAGTCTGGAGGTAGTGTTGATTTAAGGGTAGTCTG CAGCTCAGCATGTGTCCTTTGTCAAGAGGATAATTAAAGCAATGGAGTTG CTTGTCTTAGATGGAAAGAGAACAAACATTAAGTGAAGATAAACAATGAG GAGTCCATTAAAATACAGAACCTAAGTGTATCAAACTTGGAAATGGGACC GACAAACTCAGTCTGTTTTGGAAACTGGTGAATTGTACCCACTTCTGTTA AAAGTCTGCTGTAGCCAGCACAGCAAGCGCTGGCTTGACTCCCAGACACA ATGCAGAATCCATCTGTTCGGTCACTGAGCCTCATAGGTACTTGGAGGAA AGATCGTGCGCATGGGACAGGCTCCAATAAGGAGTGGGATTTCTCAAGAT ATTAAAAATGTGTTTTGCCAGTCCTCGGTTTAAATAAGGAGTCCAGGACT CTACTGGCCCTAATGGTTTAACTCCAACAAATCTGTGGTTTTAA
quality values	Open. Hide. 9 9 7 7 8 19 8 9 9 9 9 9 10 8 10 10 15 8 10 10 10 11 11 11 8 8 8 8 8 8 12 12 19 13 12 13 9 10 10 9 8 9 7 6 8 9 9 9 11 17 20 24 30 25 13 18 3 0 0 3 0 3 8 7 6 6 6 6 7 7 8 8 8 8 8 10 10 21 24 37 37 37 41 41 40 48 48 48 48 50 50 50 50 50 57 59 59 59 57 47 43 48 42 37 37 37 37 37 42 43 47 51 68 68 68 68 68 68 50 50 53 50 57 47 47 47 41 48 46 50 50 50 57 68 68 68 68 68 68 68 68 68 57 57 57 59 57 50 50 40 40 29 38 38 50 59 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 57 57 57 68 68 68 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 54 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 68 59 59 47 47 47 57 57 54 54 54 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 53 53 48 54 54 54 57 68 68 68 68 68 68 59 59 57 57 57 48 48 48 57 57 53 53 53 50 57 57 57 50 50 50 59 59 34 28 23 23 18 15 12 12 12 24 24 39 41 41 50 50 50 53 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 59 57 57 57 57 46 46 43 46 43 48 47 48 42 42 42 48 57 50 50 53 53 53 57 59 57 48 48 48 48 48 48 48 48 48 59 48 48 40 40 40 41 43 43 31 25 25 37 37 37 39 39 39 39 38 31 31 39 41 47 47 46 41 41 40 40 39 37 35 34 30 24 28 30 30 28 35 36 37 17 17 17 17 19 14 12 9 9 9 12 11 11 11 11 11 13 14 26 18 17 12 3 0 3 18 18 22 24 14 18 11 11 11 11 10 12 12 12 11 11 19 12 15 15 22 11 10 9 9 9 10 10 10 11 19 15 11 11 9 11 9 9 9 9 17 14 10 10 10 16 15 14 12 9 9 9 9 9 9 15 12 11 10 9 8 8 8 8 8 8 15 21 24 24 18 10 10 11 15 13 11 13 12 14 14 15 13 8 9 9 8 6 6 6 6 6 7 14 8 8 8 8 8 8 10 10 10 10 10 10 9 12 12 13 19 9 9 10 10 8 11 8 9 9 9 16 14 16 12 10 9 10 8 8 8 8 8 10 8 10 10 12 12 9 9 9 10 10 12 12 14 12 9 9 9 9 9 10 9 9 9 12 12 12 12 12 11 11 11 14 20 12 12 11 11 11 11 11 11 12 17 11 11 11 23 17 15 12 10 11 11 16 16 15 11 8 8 8 8 6 6 6 6 8 6 9 10 11 9 8 8 10 8 8 8 9 9 9 9 8 8 8 8 8 10 12 8 8 9 9 9 9 14 8 8 8 8 7 7 7 7 7 6 6 6 7 11 15 15 8 8 6 6 6 6 8 8 8 8 6 6 6 8 8 10 7 6 6 6 6 8 8 8 8 8 6 10 6 6 6 6 11 10 10 7 8 11 12 10 9 11 10 8 8 8 8 6 6 8 10 11 11 10 13 10 10	Open. Hide. 6 6 6 8 7 7 9 7 8 10 21 25 39 36 39 39 39 37 37 39 39 39 44 39 26 23 12 9 9 9 12 9 7 6 6 6 10 15 15 23 21 24 37 37 33 36 36 36 36 33 50 50 50 41 33 22 16 9 10 10 10 10 16 15 20 15 24 28 29 29 29 29 32 36 36 38 36 36 36 42 57 57 53 53 53 53 53 53 53 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 50 51 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 46 46 47 29 22 11 6 6 6 6 10 18 23 34 41 50 50 50 50 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 46 47 48 59 59 68 68 68 59 59 54 48 48 59 59 57 54 59 57 59 57 59 57 68 68 68 68 68 68 68 59 59 48 48 48 48 48 57 48 48 54 57 57 57 59 59 59 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 59 59 54 57 50 43 37 37 50 50 59 68 59 59 48 48 48 59 59 59 57 50 43 59 59 59 44 44 31 31 31 42 44 44 59 57 57 47 57 57 57 57 57 57 57 59 59 57 46 43 43 57 57 59 54 54 59 59 57 57 57 54 54 54 68 54 54 43 44 36 42 39 48 48 50 54 48 57 57 57 59 59 59 59 57 57 42 47 47 44 44 39 48 48 48 46 46 41 37 33 21 21 28 27 29 37 41 43 47 59 59 47 46 48 46 47 47 41 37 39 33 24 22 28 28 34 34 40 40 40 41 36 39 22 21 11 12 12 21 17 19 24 17 17 12 15 15 28 30 41 37 39 35 31 31 20 20 20 21 13 14 18 21 25 25 27 27 16 21 22 32 32 37 32 28 18 17 28 30 28 23 23 18 12 12 25 18 12 11 11 8 10 11 11 11 15 15 12 11 10 13 13 10 13 11 19 12 21 16 16 10 10 10 15 9 8 8 10 9 8 10 12 21 20 20 16 12 12 16 17 17 10 10 10 10 10 8 13 8 8 8 11 17 20 20 20 24 19 13 11 11 24 25 26 15 10 8 8 8 8 9 10 11 10 6 6 7 6 6 8 9 9 9 9 9 8 8 11 12 9 9 11 11 11 14 15 12 17 11 11 10 15 15 15 16 18 16 15 11 15 11 9 8 9 9 9 10 17 10 9 9 8 8 8 8 8 8 8 8 9 9 10 12 9 9 9 9 10 11 8 8 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no419_j05.g1 MSMg01no419_j05.g1 CHROMAT_FILE:
MSMg01no419_j05.g1 PHD_FILE: MSMg01no419_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:10 2005
         (477 letters)



>mm_chr11_42740664_42741540
          Length = 877

 Score =  861 bits (445), Expect = 0.0
 Identities = 469/477 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   agagaattgactgattcatttcacttttatctatccctctccctaacacacacaaatttt 60
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 677 agagaattgactgattcatttcacttttatctatccctctccctaatacacacaaatttt 618

                                                                       
Query: 61  agatggaaacagctaattgccactgtctttgactaaatgatattgaatgacactatttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 617 agatggaaacagctaattgccactgtctttgactaaatgatattgaatgacactattttt 558

                                                                       
Query: 121 aaaaccccactaccatctcctgactcaacctgtcgctttatctttagtagtttgagaact 180
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 557 aaaaccccactaccatctcctgactcaacctgttgctttatctttagtagtttgagaact 498

                                                                       
Query: 181 ttttgaaattgggtgagtctggaggtagtgttgatttaagggtagtctgcagctcagcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttttgaaattgggtgagtctggaggtagtgttgatttaagggtagtctgcagctcagcat 438

                                                                       
Query: 241 gtgtcctttgtcaagaggataattaaagcaatggagttgcttgtcttagatggaaagaga 300
           ||||||| || |||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 437 gtgtcctctgccaagaggataattaaagcaacggagttgctcgtcttagatggaaagaga 378

                                                                       
Query: 301 acaaacattaagtgaagataaacaatgaggagtccattaaaatacagaacctaagtgtat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 acaaacattaagtgaagataaacaatgaggagtccattaaaatacagaacctaagtgtat 318

                                                                       
Query: 361 caaacttggaaatgggaccgacaaactcagtctgttttggaaactggtgaattgtaccca 420
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 317 caaacttggaaatgggaccgacagactcagtctgttttggaaactggtgaattgtaccca 258

                                                                    
Query: 421 cttctgttaaaagtctgctgtagccagcacagcaagcgctggcttgactcccagaca 477
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cttctgttaaaagtctgctgtagccagcacagcaagcgctggcttgactcccagaca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space:   404889
Effective search space used:   404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information