Query= MSMg01no421_l10.b1 MSMg01no421_l10.b1 CHROMAT_FILE:
MSMg01no421_l10.b1 PHD_FILE: MSMg01no421_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:59 2005
(511 letters)
>mm_chr11_102854487_102855396
Length = 910
Score = 911 bits (471), Expect = 0.0
Identities = 501/511 (98%), Gaps = 1/511 (0%)
Strand = Plus / Plus
Query: 1 tactgtcctcaacttatcatgcagaaaccaaaggtaaggagacagagctggaccccagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tactgtcctcaacttatcatgcagaaaccaaaggtaaggagacagagctggaccccagac 260
Query: 61 ctgggcctccggctcctcctgagaggggactcaaagtctgcagttccgagtctgcactct 120
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgggtctctggctcctcctgagaggggactcaaagtctgcagttccgagtctgcactct 320
Query: 121 cctaaccaaatcccttggtggtctgctgtacacgcagtgtcccgcactccgcaggattcc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 cctaaccaaatcccttggtggtctgctgtacacgcagtgtcccgcactccacaggattcc 380
Query: 181 aggatgggtctctcagttacagggcaccgctggggttcagaactctgctctgccaggttt 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 aggatgggtctctcagttacagggcaccgctggggttcacaactctgctctgccaggttt 440
Query: 241 ctgctcgaccccttctcttctgagggagcaggccactgtgacactctgtgagtgacagct 300
|||||||||||| | | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgctcgaccccacc-cacccgagggagcaggccactgtgacactctgtgagtgacagct 499
Query: 301 cttcactgaccgtcccagcccttttttgttgcttggaaatgtgcggggagctaatgagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cttcactgaccgtcccagcccttttttgttgcttggaaatgtgcggggagctaatgagct 559
Query: 361 gctctccgaggcttaggcagctctgtgaaaggggcattaagaatggccactgctgccttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gctctccgaggcttaggcagctctgtgaaaggggcattaagaatggccactgctgccttc 619
Query: 421 acattagtcacactcatttttggccttaataggctgctgcgaacaagatctacacatcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 acattagtcacactcatttttggccttaataggctgctgcgaacaagatctacacatcag 679
Query: 481 caggtctgtagacgccggccgggaaggctga 511
|||||||||||||||||||||||||||||||
Sbjct: 680 caggtctgtagacgccggccgggaaggctga 710
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 910
Length adjustment: 10
Effective length of query: 501
Effective length of database: 900
Effective search space: 450900
Effective search space used: 450900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_l10.g1 MSMg01no421_l10.g1 CHROMAT_FILE:
MSMg01no421_l10.g1 PHD_FILE: MSMg01no421_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:59 2005
(407 letters)
>mm_chr11_103012265_103013071
Length = 807
Score = 716 bits (370), Expect = 0.0
Identities = 397/406 (97%), Gaps = 1/406 (0%)
Strand = Plus / Minus
Query: 2 agaggccagcctggtctatactgggagttccaagccagcctgggctatacagtgagacac 61
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 767 agaggccagcctggtctatactgggagttccaagccagcttgggctatacagtgagacac 708
Query: 62 tgtttaaaacaaccaaaacaacaataacaaactcagaaatctgcctgcctctgcctccca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tgtttaaaacaaccaaaacaacaataacaaactcagaaatctgcctgcctctgcctccca 648
Query: 122 agtgctggtattaaaggcgtgcgccaccactgcccggctacaaatagacttattttaatt 181
|||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||||||
Sbjct: 647 agtgctggtattaaaggcatgcgccacca-tgcctggctataaatagacttattttaatt 589
Query: 182 attagaccgacaaatgggcaaaggaggaactgtttcactgatctcagcctagctggtagg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 attagaccgacaaatgggcaaaggaggaactgtttcactgatctcagcctagctggtagg 529
Query: 242 gaagctgctggtgatcttaggacgagatgcagaaactctgcttgggtgctctggaagctc 301
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 528 gaagctgctggtgatcagaggacgagatgcagaaactctgcttgggtgctctggaagttc 469
Query: 302 attgtgacaatgtccgtccgagttcagtacagttacacttctgccttcctcgggttaccc 361
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 468 attgtgacaatgtccgtccgagttcagtacagttacacttcttccttcctcgggttaccc 409
Query: 362 aatgcagaacccaccttcatgcctgccagcgagggtgacatcttct 407
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aatgcagaacccaccttcatgcctgccagcgagggtgacatcttct 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
