XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCT
TCTCCTCCCCCAATCTACCTGTTTATTGGGGACTGGGAGGCTTTGTGGAC
CTATGCCAAATCCATGTTTGACTGACAACAGGCCCAGTCATGCACAGACT
TGGGAAATCACTCTCTTAATACTATCTCCTTCAATAGACATCCAAGTGTC
TAGTGTTGTCACGGACTACTTATAGACAACATACACAGGAAGGACAGAAG
CAAAGATAGTCATATTTCTAATGTTTATTGAGTTCATTTTAACAAATAAG
TAAAAATATAAAAATCATCCATATCAGTGGCAAGCCTAACTAGGCCTGTG
AAGTCAGTACCCACAAAGCTAAGCCTACAGCAGTCAAGACCAGCCTGAGT
AACTTAGTAATATTTATGAACTATACTTTATGATTTATAATTAAATACAA
ACACAATGTGTGCCTGTTACTTCCTTGGATTACTGACATGCACTCTTTAG
ACCAACCAGAGACATTATTAACATAAATATATGGTTTGAAAATTCCTAAG
CAGGCACACTTTTGTAAGCCCAGCACTAAGGTGGCAAGAATAGGATGACC
ATAAGTTTGACGCTAGCCTGGGCTACATTGACCACTCATNAATCNNAAAA
AAAAAATAATTAAAATAAATAGAATATCTTTATCAGCCAAAAGTTAGCAA
TAAATAAAAACAGTGGATACTCTTTTG

TGTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAACCAC
CTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAAC
AACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATT
CAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTC
CCTTGTTGGTGGGATTGCAGGCTTGTACAACTACTCTGGAAATCAGTCTG
GAGGTTCTTCAGATTTTTGGACATCGTACTACCGGAGGATCCCGCAATAC
CTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACA
TGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAA
AGCACCTAGATGCCCCTCAACAAAGGAATGGATACAGAAAATGTGGTACA
TTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAA
TTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAAC
ACATTCACAAAGGAACTCACACAATATGTACTCCCTGATAAGTGGATATT
ATCCCCTAACCTAGGATACCCAAGATATAAGATACATTTCCCTAAACCCT
TGAAACTCCGGAAAATGGAAAATGAAGTG

Query= MSMg01no422_f16.b1 MSMg01no422_f16.b1 CHROMAT_FILE:
MSMg01no422_f16.b1 PHD_FILE: MSMg01no422_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:47 2005
         (577 letters)



>mm_chr11_28849323_28850299
          Length = 977

 Score = 1108 bits (573), Expect = 0.0
 Identities = 576/577 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatctacctgtttattggggactgggaggctttgtggacctatgccaaatccatgtttga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatctacctgtttattggggactgggaggctttgtggacctatgccaaatccatgtttga 260

                                                                       
Query: 61  ctgacaacaggcccagtcatgcacagacttgggaaatcactctcttaatactatctcctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgacaacaggcccagtcatgcacagacttgggaaatcactctcttaatactatctcctt 320

                                                                       
Query: 121 caatagacatccaagtgtctagtgttgtcacggactacttatagacaacatacacaggaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatagacatccaagtgtctagtgttgtcacggactacttatagacaacatacacaggaa 380

                                                                       
Query: 181 ggacagaagcaaagatagtcatatttctaatgtttattgagttcattttaacaaataagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggacagaagcaaagatagtcatatttctaatgtttattgagttcattttaacaaataagt 440

                                                                       
Query: 241 aaaaatataaaaatcatccatatcagtggcaagcctaactaggcctgtgaagtcagtacc 300
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaatataaaaatcatctatatcagtggcaagcctaactaggcctgtgaagtcagtacc 500

                                                                       
Query: 301 cacaaagctaagcctacagcagtcaagaccagcctgagtaacttagtaatatttatgaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacaaagctaagcctacagcagtcaagaccagcctgagtaacttagtaatatttatgaac 560

                                                                       
Query: 361 tatactttatgatttataattaaatacaaacacaatgtgtgcctgttacttccttggatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatactttatgatttataattaaatacaaacacaatgtgtgcctgttacttccttggatt 620

                                                                       
Query: 421 actgacatgcactctttagaccaaccagagacattattaacataaatatatggtttgaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actgacatgcactctttagaccaaccagagacattattaacataaatatatggtttgaaa 680

                                                                       
Query: 481 attcctaagcaggcacacttttgtaagcccagcactaaggtggcaagaataggatgacca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attcctaagcaggcacacttttgtaagcccagcactaaggtggcaagaataggatgacca 740

                                                
Query: 541 taagtttgacgctagcctgggctacattgaccactca 577
           |||||||||||||||||||||||||||||||||||||
Sbjct: 741 taagtttgacgctagcctgggctacattgaccactca 777


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space:   548289
Effective search space used:   548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)