Query= MSMg01no422_h05.b1 MSMg01no422_h05.b1 CHROMAT_FILE:
MSMg01no422_h05.b1 PHD_FILE: MSMg01no422_h05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:54 2005
(441 letters)
>mm_chr11_86715977_86716817
Length = 841
Score = 797 bits (412), Expect = 0.0
Identities = 434/446 (97%), Gaps = 8/446 (1%)
Strand = Plus / Minus
Query: 4 ggaattccaggagagtccggactatatggagagacctgtttgaaaaaaagccaaccaatg 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ggaattccaggagagtcaggactatatggagagacctgtttgaaaaaaagccaaccaatg 701
Query: 64 agacaaacaaacacctccaaccaaaccaaccaactaaacaaacaaacaaacaaaaac--- 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 agacaaacaaacacctccaaccaaaccaaccaactaaacaaacaaacaaacaaaaaccaa 641
Query: 121 -----aaaaacccaaaacaacaacaacaacaaaaacccaatgtctttgaggtgattcact 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 aaaaaaaaaacccaaaacaacaacaacaacaaaaacccaatgtctttgaggtgattcact 581
Query: 176 ggaggatgagggttcagattcaagggagaacaactattaaaacaaagatcagaatccagt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ggaggatgagggttcagattcaagggagaacaactattaaaacaaagatcagaatccagt 521
Query: 236 gtagccgaacagcgtacaaagagaaggatgcaggagatgaacaacggggagaggtggaca 295
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 520 gtagctgaacagcgtacaaagaggaggatgcaggagatgaacaacggggagaggtggaca 461
Query: 296 tcagctggctttgtaggcccctgcggcccttctagagtttgatcttgccggggtgtagct 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tcagctggctttgtaggcccctgcggcccttctagagtttgatcttgccggggtgtagct 401
Query: 356 gagtggtatttacctgatattcacaattctctagattcaatcctcagtaagagaggaagg 415
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 400 gagtggtatttacctgatattcacaattctctaggttcaatcctcagtaagagaggaagg 341
Query: 416 aagggagggagagaaggagggaggtg 441
||||||||||||||||||||||||||
Sbjct: 340 aagggagggagagaaggagggaggtg 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_h05.g1 MSMg01no422_h05.g1 CHROMAT_FILE:
MSMg01no422_h05.g1 PHD_FILE: MSMg01no422_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:54 2005
(164 letters)
>mm_chr11_86526799_86527362
Length = 564
Score = 273 bits (141), Expect = 5e-78
Identities = 147/149 (98%)
Strand = Plus / Plus
Query: 1 atttatacacagtgacacattcctcaatccatgattcctctaagagctgactaaagaaat 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 atttatacacagtgacacattcctcaatccatgattcttctaagagctgactaaagaaat 260
Query: 61 acatactaagcaggataggactttgcccaatggtagccactccttttaagggttagaaca 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 acatactaagcaggataggactttccccaatggtagccactccttttaagggttagaaca 320
Query: 121 gaatgtgtgtgtgtgtgtgtgtgtgtgtg 149
|||||||||||||||||||||||||||||
Sbjct: 321 gaatgtgtgtgtgtgtgtgtgtgtgtgtg 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space: 86736
Effective search space used: 86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
