Query= MSMg01no422_p21.b1 MSMg01no422_p21.b1 CHROMAT_FILE:
MSMg01no422_p21.b1 PHD_FILE: MSMg01no422_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:34 2005
(249 letters)
>mm_chr11_62367288_62367936
Length = 649
Score = 431 bits (223), Expect = e-125
Identities = 244/253 (96%), Gaps = 6/253 (2%)
Strand = Plus / Minus
Query: 1 tgcttctgcttccccccagtgctgacactaagggcctgtttttttattgccgtcctggga 60
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 333 tgcttctgcttccccccagtgctgacactaagggcctgtttttttagtgcagtcctggga 274
Query: 61 ttgaatgctggaatttcttttactctacaaacctgtatctccagatgaaaaagtaccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttgaatgctggaatttcttttactctacaaacctgtatctccagatgaaaaagtaccagc 214
Query: 121 tacaaatgcattttaaaaatcttaggccgggcgtggtggcgcacatctttaatcccagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tacaaatgcattttaaaaatcttaggccgggcgtggtggcgcacatctttaatcccagca 154
Query: 181 ctctta--aggc--agtcaggtgaatttctgagttcgaggccagcctggtctgcaaagtg 236
||| | |||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 153 ctc--aggaggcagagtcaggtgaatttctgagttctaggccagcctggtctgcaaagtg 96
Query: 237 agttccaggacag 249
|||||||||||||
Sbjct: 95 agttccaggacag 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no422_p21.g1 MSMg01no422_p21.g1 CHROMAT_FILE:
MSMg01no422_p21.g1 PHD_FILE: MSMg01no422_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:34 2005
(519 letters)
>mm_chr11_62168881_62169799
Length = 919
Score = 973 bits (503), Expect = 0.0
Identities = 515/519 (99%)
Strand = Plus / Plus
Query: 1 ttttgcaatgttaaaagaaaatgtgcttgtcccagatgcagatgctttggatcatcctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttgcaatgttaaaagaaaatgtgcttgtcccagatgcagatgctttggatcatcctaa 260
Query: 61 ggaagcttggagtaaatgactggattaatatggagaacaagagatcgggtttatgatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaagcttggagtaaatgactggattaatatggagaacaagagatcgggtttatgatctg 320
Query: 121 cgagagttagctatccaaagatggtttttaaataggaagagagaaatgccacaggcagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgagagttagctatccaaagatggtttttaaataggaagagagaaatgccacaggcagag 380
Query: 181 catagagagagctgtctggagatctgcagagaaagcagactggaaagctgtctcaagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catagagagagctgtctggagatctgcagagaaagcagactggaaagctgtctcaagcag 440
Query: 241 acatagggcaccagcttggcccatgtttgacttcaagtagtttgttttcaaagctcccag 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatagggcaccagcttggctcatgtttgacttcaagtagtttgttttcaaagctcccag 500
Query: 301 acaacccttttctcaggaatctggacctagccaaggctggtccttcgttcgcatttatta 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 acaacccttttctcaggaatctggacctagccaaggctggtccttcattcgcatttatta 560
Query: 361 aattacctacagcattttccacaatgcactcaaaatgtaagctactattaacaatatttt 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattacctacagcatttaccacaatgcactcaaaatgtaagctactattaacaatatttt 620
Query: 421 atatgtcttaaaaatgcaaaaagaacatctatgaaaagagcaagagatcagaagatattt 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 atatgtcttaaaaatgcaaaaagaacatctatgaaaatagcaagagatcagaagatattt 680
Query: 481 gaaaagttgcaacacatccattggaacccagaaagttgt 519
|||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaaaagttgcaacacatccattggaacccagaaagttgt 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
