Query= MSMg01no423_h18.b1 MSMg01no423_h18.b1 CHROMAT_FILE:
MSMg01no423_h18.b1 PHD_FILE: MSMg01no423_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:10 2005
(245 letters)
>mm_chr11_74486241_74486886
Length = 646
Score = 437 bits (226), Expect = e-127
Identities = 241/246 (97%), Gaps = 1/246 (0%)
Strand = Plus / Minus
Query: 1 cacataaatactcctttgaccccttcctgtgctggcagggtcgggg-gggggggtttcta 59
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 346 cacatatatactcctttgaccccttcctgtgctggcagggtcggggagggggggtttcta 287
Query: 60 tcagggagccacattcccagtctttgctttcccatgtggtcactgcccactcatctcaat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tcagggagccacattcccagtctttgctttcccatgtggtcactgcccactcatctcaat 227
Query: 120 gaacactgaaaatagttgacttttgggccggttgtcgtggcacacgcctttaatcccagc 179
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 226 gaacactgaaaatagttggcttttgggccggttgtcgtggcacacacctttaatcccagc 167
Query: 180 acttggtaggcagagacaggaggatttccgagttcgaggccagcctggtctacaatgtga 239
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 acttggaaggcagagacaggaggatttccgagttcgaggccagcctggtctacaatgtga 107
Query: 240 gttcca 245
||||||
Sbjct: 106 gttcca 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no423_h18.g1 MSMg01no423_h18.g1 CHROMAT_FILE:
MSMg01no423_h18.g1 PHD_FILE: MSMg01no423_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:11 2005
(204 letters)
>mm_chr11_74335661_74336264
Length = 604
Score = 364 bits (188), Expect = e-105
Identities = 200/208 (96%), Gaps = 8/208 (3%)
Strand = Plus / Plus
Query: 1 accgcgagcgaggacaggggatcgggcgcagccagctttaccttttctctttattctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accgcgagcgaggacaggggatcgggcgcagccagctttaccttttctctttattctgtt 260
Query: 61 ttcgagatttgtgcaggagtccgatgagtaccacggcggctcggatccccgcctttcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcgagatttgtgcaggagtccgatgagtaccacggcggctcggatccccgcctttcggc 320
Query: 121 aatgcatcctcccggccggctgggacatggcgaggccgccggcggtgcccagccgttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 aatgcatcctcccggccggctgggacatggcgaggccgccggcggtgcccagccg----c 376
Query: 181 ----tcgcccgccgcgcgtccccgccgc 204
||||||||||||||||||||||||
Sbjct: 377 gccctcgcccgccgcgcgtccccgccgc 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
