XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAAGCAT
TTACAGCTCTGATTTAAAAATAAAGATGAAAACTTAGAAAGAACAAACAG
AGTTATTGATAACATGTAGATACCTTTACTATTTTGCCTAGCTCTTACTT
AAACAAATCCTAGCATGTGTTTCTGTGTGCTGGCAACAGGAGACTATGCA
GTAGTAACTGTAATATTACAGGTTTGGCATTTCTGTTTGTATTAGTTGTT
GGATCAGATTGTTGATCTCAGAGAACAAATCAAAATAAATTAGTTTTCTT
GGGGAGCTAATGACCCTTATGTTGTAGTGTCTCATATTTTACATGGACAT
ATCACAAAGCAATAATGGATCTCCAAGGCCCTGTTCTAATTCCACACTAA
TTTTGTTTATCCCATTTTTCTTTGTCCACAATCACATTTGAGTTCCAAAT
TCTTGCCTGTTTACAGAGAGTGAATCTCTGTAACGAAACTCTGACATAGT
AATGTCAAACATAGCGAAAAAGGAGAGCTTCGCTGGTGATGCTGGTTACT
GCATTCCCCAAGGGCCTCAGCCTCATAGCATGCACAGGTTTTGAAAAGTC
ATGAACAAAACATTGAAATGAATGCTGTTTCTTGGTCCTTGTCGAAGGGT
AACTGATTGAGATTATTTTATATAACTATTATTATTAACCCCTANAGAGG
ATTTACTGTATATCTGAGGAAAAAAGACTCAGGTCCATAAATCAAATN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXACCACCTCTTTCTTTCTGCCTTTTGTTGATAGGCCA
TTCCTTTTTTTAACAGGTAATGCTTCCACATAGTACACAAGAGATGTTTA
CCATAATTCTAGCTAAGATTTTAAGCACCATGTTGAATAATAGTGGAAGG
AATAGATATCCTTGTCTTGTTCCAGAAGAAATGCTTCAATGTTTCACATT
GACTTTAAAGGTTATCAATACTATATAGGCTTTATTACCTAGAGAATTCC
AAATGACTTTTCTGCATCTATGTATATGATTATGAAATTTCAGTCTTTAA
GGCTATTAATGTTGTCTATTCTATTATCTGTGTTTATTTATGGATGTAGA
AATGATTTTCCATCTCAAGTGGGAAATAAGCTAGTCATCATTATGTTATT
TCCAATATAAACTTGAGTTCATTTTGTTAGTATTTTGTGGAGGATTATTC
ATCCATGTTCATCAAGGGAAGCATTCTGCATGTTGTGTTTTGTGTCAGAT
CGCTTTTTGTGTGCATGTGTGCATGTATATGTGTGTGTTTGTTTCTTTGT
CTGGNGNTCATATCAAAGTTACATTGGCTTCATGGATTTGTTAGCCTTCC
TTTTCTGCCTATTTTATAGAGATACTTGAGAAGTATTGGTATTACATTCT
CCTTATAGATTGGCATAAACCTAGAGCACTTTCTTTGCGTG

Query= MSMg01no423_o04.b1 MSMg01no423_o04.b1 CHROMAT_FILE:
MSMg01no423_o04.b1 PHD_FILE: MSMg01no423_o04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:40 2005
         (510 letters)



>mm_chr11_27742664_27743573
          Length = 910

 Score =  963 bits (498), Expect = 0.0
 Identities = 507/510 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctctgatttaaaaataaagatgaaaacttagaaagaacaaacagagttattgataacat 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 710 gctctgatttaaaaataaagatgaaaacttaaaaagaacaaacagagttattgataacat 651

                                                                       
Query: 61  gtagatacctttactattttgcctagctcttacttaaacaaatcctagcatgtgtttctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gtagatacctttactattttgcctagctcttacttaaacaaatcctagcatgtgtttctg 591

                                                                       
Query: 121 tgtgctggcaacaggagactatgcagtagtaactgtaatattacaggtttggcatttctg 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tatgctggcaacaggagactatgcagtagtaactgtaatattacaggtttggcatttctg 531

                                                                       
Query: 181 tttgtattagttgttggatcagattgttgatctcagagaacaaatcaaaataaattagtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tttgtattagttgttggatcagattgttgatctcagagaacaaatcaaaataaattagtt 471

                                                                       
Query: 241 ttcttggggagctaatgacccttatgttgtagtgtctcatattttacatggacatatcac 300
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttcttggggagctaaagacccttatgttgtagtgtctcatattttacatggacatatcac 411

                                                                       
Query: 301 aaagcaataatggatctccaaggccctgttctaattccacactaattttgtttatcccat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aaagcaataatggatctccaaggccctgttctaattccacactaattttgtttatcccat 351

                                                                       
Query: 361 ttttctttgtccacaatcacatttgagttccaaattcttgcctgtttacagagagtgaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ttttctttgtccacaatcacatttgagttccaaattcttgcctgtttacagagagtgaat 291

                                                                       
Query: 421 ctctgtaacgaaactctgacatagtaatgtcaaacatagcgaaaaaggagagcttcgctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ctctgtaacgaaactctgacatagtaatgtcaaacatagcgaaaaaggagagcttcgctg 231

                                         
Query: 481 gtgatgctggttactgcattccccaagggc 510
           ||||||||||||||||||||||||||||||
Sbjct: 230 gtgatgctggttactgcattccccaagggc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space:   450000
Effective search space used:   450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)