ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTGTTTCTTTCTCTGAGCCAAACTTGTTAATTCAACAATGATCACAAAC
AGTCAGGTAGGATCGACTTGGGATTACCCAATAGTGTTGTGTCCCAAAGT
CAGGGCCACTTAGTTCTGTCTCTGGGAACTCCTGGTACTGGCTTCCATCT
AAATGTATGTGGAACCATTGTTTAAAGCTACCTTCCAATTTTCTAATATT
TCATTCAACCATCTAAGTAATGTGTGTTACTTTATCTGCTGAAACTGGAA
ATTGGAAGCCTGGCTCTTTTTAAAAATTCTCAGGCCATAATATGTATTTT
GCTGCCTGGGAATGTTTACAAAAGGTAACACATTGCCAAATTATAAGCTT
GAGGGAATATTTCCTAAATAGAAATAGCAAAGCCCCTTCTCCTTCATCCT
ATACCTTCCTTCCTCTATTTCTCTCAAAAGAAGAAGCAAAACTCGTGAAG
ATGAAAAGGCAAATTACACCTCTTTTTCCTGCAATTTTTTCTACTACAAA
ATTCTATGCCATCATCCCTTCTTTTGATTATTGTCATTTCTTTTGACTAG
AACTGGTCTCAGGGATCTTCAACTATAATCAGTATTCATAATTTCCCATC
CAGGAGAGATTCCCTTCTGGAAAATCACTGTGATTTTGCTCCCCAAAATC
AAATCATACTCTGCACCAAAAATACCCAGTACTGGTTATA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTATAACCCCATGGGACAAGGAATTG
TTGAACATGCTCATCAAACTCTGAAAAACTGGCTTTTTACAACGAAACAG
GGGCAGCTTTACCCCCCAAAAGTCACCAAAAGCACATCTTGCTTTTTTCT
TGTTCTTTTTAAATTTTTTGCAAACTGATGTTAAAGGTCAGTCTGCAGCG
GTTCACCACTGGCATCCAGTTACTTCCAGTTCTTATGTTAAATGCGTGGA
ATAGTCCAGACCCCATTTTAATCTGGTGAAGAGGTTCAGTATGTGTTTTT
TCACAAAAAGAAGACAGAGAGCAATGGCTGCCTGAAAGATTGGTTCGTCA
AGTGGACACAGATCCTGAATCTTCTAGTAAGTATAATTCTAATCTTGATG
ATGGCTAAAAATTCTTTTTAGCAGGAAGAGTTAATTTGGAGTACAGCCTC
CACTTCCAGAGAATTTACAGTCTTTCTGTTAATTCTCAAAGCCTGCTCCC
CCACACCAGGAGGNCAGAGTCTGAGCTTGATCGTTGCTAATTTGCAACTG
AATAGAGTACCTGGAGATCCCCAAAGAAGCTTTTATCCTGTGGTTTTTCA
ACTGTCTCATCTTTGTTTTCCAAGCAGGTTAGTCTTTCCCTAAGGCCTGA
ATTCATTATGAGCTGCGCCTCGCCTCCCCGCATGCCCAGTCTGTCCAAAT
TCCTCATTA

Query= MSMg01no424_a21.b1 MSMg01no424_a21.b1 CHROMAT_FILE:
MSMg01no424_a21.b1 PHD_FILE: MSMg01no424_a21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:54 2005
         (609 letters)



>mm_chr11_10717859_10718868
          Length = 1010

 Score = 1133 bits (586), Expect = 0.0
 Identities = 601/606 (99%), Gaps = 1/606 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtttctttctctgagccaaacttgttaattcaacaatgatcacaaacagtcag 64
           |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtttcgttctctgagccaagcttgttaattcaacaatgatcacaaacagtcag 264

                                                                       
Query: 65  gtaggatcgacttgggattacccaatagtgttgtgtcccaaagtcagggccacttagttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtaggatcgacttgggattacccaatagtgttgtgtcccaaagtcagggccacttagttc 324

                                                                       
Query: 125 tgtctctgggaactcctggtactggcttccatctaaatgtatgtggaaccattgtttaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtctctgggaactcctggtactggcttccatctaaatgtatgtggaaccattgtttaaa 384

                                                                       
Query: 185 gctaccttccaattttctaatatttcattcaaccatctaagtaatgtgtgttactttatc 244
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 385 gctaccttccaattttctaatatttcattctaccatctaagtaatgtgtgttactttatc 444

                                                                       
Query: 245 tgctgaaactggaaattggaagcctggctctttttaaaaattctcaggccataatatgta 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 tgctgaaactggaaattggaagcctggctctttttaaaaattctcaggccattatatgta 504

                                                                       
Query: 305 ttttgctgcctgggaatgtttacaaaaggtaacacattgccaaattataagcttgaggga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttttgctgcctgggaatgtttacaaaaggtaacacattgccaaattataagcttgaggga 564

                                                                       
Query: 365 atatttcctaaatagaaatagcaaagccccttctccttcatcctataccttccttcctct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atatttcctaaatagaaatagcaaagccccttctccttcatcctataccttccttcctct 624

                                                                       
Query: 425 atttctctcaaaagaagaagcaaaactcgtgaagatgaaaaggcaaattacacctctttt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atttctctcaaaagaagaagcaaaactcgtgaagatgaaaaggcaaattacacctctttt 684

                                                                       
Query: 485 t-cctgcaattttttctactacaaaattctatgccatcatcccttcttttgattattgtc 543
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttcctgcaattttttctactacaaaattctatgccatcatcccttcttttgattattgtc 744

                                                                       
Query: 544 atttcttttgactagaactggtctcagggatcttcaactataatcagtattcataatttc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atttcttttgactagaactggtctcagggatcttcaactataatcagtattcataatttc 804

                 
Query: 604 ccatcc 609
           ||||||
Sbjct: 805 ccatcc 810


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1010
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1000
Effective search space:   599000
Effective search space used:   599000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)