Query= MSMg01no424_h12.b1 MSMg01no424_h12.b1 CHROMAT_FILE:
MSMg01no424_h12.b1 PHD_FILE: MSMg01no424_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:26 2005
(580 letters)
>mm_chr11_58585882_58586860
Length = 979
Score = 1067 bits (552), Expect = 0.0
Identities = 573/580 (98%), Gaps = 1/580 (0%)
Strand = Plus / Minus
Query: 1 gaaatacattagttatgctagcctatgctttcatgacaatccatgtgttgagaaagattt 60
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gaaatacattagtcatgctaacctatgctttcatgacaatccatgtgttgagaaagattt 720
Query: 61 agtgaatgcatagagaaggacacacaatgtgagaattattttgcctataaggttactctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 agtgaatgcatagagaaggacacacaatgtgagaattattttgcctataaggttactctt 660
Query: 121 tgaaaatgggcatggctcaactgaatcactaaagtttgtagatgatttggtagtcatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tgaaaatgggcatggctcaactgaatcactaaagtttgtagatgatttggtagtcatttg 600
Query: 181 aatgcctatcaaaagggctaaaatatctgtctggtttatttacaaagtttactgaataat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aatgcctatcaaaagggctaaaatatctgtctggtttatttacaaagtttactgaataat 540
Query: 241 gagtgttataggccaggtttatccaagaagtatctgttcccaccttgccttctgcattta 300
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gagtggtaaaggccaggtttatccaagaagtatctgttcccaccttgccttctgcattta 480
Query: 301 catgaaaaaaccaaaacccaaaacaaaacccctgccttttgatttgcatatagttaaggg 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 479 catgaaaaaaccaaaacccaaaacaaagcccctgccttttgatttgcatatagttaaggg 420
Query: 361 gaagtatttgtctaatgccttagctggtttaaaaaaaaacaaattaaatctatactattc 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 419 gaagtatttgtctaatgccttagctggttt-aaaaaaaacaaattaaatctatactattc 361
Query: 421 tacttaagtcataactcaatgaagacacacctttgggtgtcaattgtcagagaaatgaga 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tacttaagtcataactgaatgaagacacacctttgggtgtcaattgtcagagaaatgaga 301
Query: 481 attatgcttgagctgtgttctactcaattatacaggaatttgtaagccagcatctagagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 attatgcttgagctgtgttctactcaattatacaggaatttgtaagccagcatctagagc 241
Query: 541 ttttcaacttttatatttaaatagcttggtacctatgggc 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttttcaacttttatatttaaatagcttggtacctatgggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 979
Length adjustment: 10
Effective length of query: 570
Effective length of database: 969
Effective search space: 552330
Effective search space used: 552330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_h12.g1 MSMg01no424_h12.g1 CHROMAT_FILE:
MSMg01no424_h12.g1 PHD_FILE: MSMg01no424_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:26 2005
(313 letters)
>mm_chr11_58446205_58446911
Length = 707
Score = 524 bits (271), Expect = e-153
Identities = 300/313 (95%), Gaps = 6/313 (1%)
Strand = Plus / Plus
Query: 1 catgacattattagtaacttaatatcaaaccttgatgtaataatgtgtaattactgttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgacattattagtaacttaatatcaaaccttgatgtaataatgtgtaattactgttct 260
Query: 61 attgccctgcggttcctctaatatgtttttccatcatatattcaaagcaacagtaccaat 120
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 261 attgccctgcggttcctctaatctgtttttccatcaaatattcaaagcaacagtaccaat 320
Query: 121 ggccatggcctttgaaaccatgagccaaaataaacatttccttaataagttaataacctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccatggcctttgaaaccatgagccaaaataaacatttccttaataagttaataacctc 380
Query: 181 aagcattttaatcacaatactgaaaagctaattcactcatagacatgcaaactccctaca 240
| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 aggcattttaatcacaatgctgaaaagctaactcactcatagacatgcaaactccctaca 440
Query: 241 gtaccatagttccatccagactatggaggccatatctgtaaatgtgacttttcctcccct 300
||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 ------tagctccatccagactatggaggccatatctgtaaacgtgacttttcctcccct 494
Query: 301 ctctaaatgcagg 313
|||||||||||||
Sbjct: 495 ctctaaatgcagg 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 707
Length adjustment: 9
Effective length of query: 304
Effective length of database: 698
Effective search space: 212192
Effective search space used: 212192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
