XXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAATTCATTGC
TTTTAACTGCTGAGTAGTACTCCTTTGTATAAATGTACCACATATTCTGT
ATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTAT
TATAAATAAGACTGCGATGAACATAGTGGAGCATGTGTCCTTATTACAAG
TTGGAATATCTTCTGGGTATATGCTCAGGAGAGGTATTACTGGATCTTCG
GATAGTACTATATCTAATTTTCTGAGGAGCCACCAGACTGATTTCCAGAG
TGGTTGTACAAGTTTGCAATCCCACCAACAATGGATGAGTGTCCCTCTTT
CTCCATATCCTCACCAGCATCTTCTGTCACCTGAATTTTTTATCTTAGCC
ATTCTGACTAGTGTAAGGTAGAATCTCAGGATTGTTGTGATTTGCATTTC
CCTGATGATTAAGGATGTTGAACATTTTTCACATGCTTCTCAGCCATTCG
GTTTTCCTACTTTGAGAATTTTTTGTTTAGTTCTGTATACCATTTTTTAA
AAGGGTTATTGGATTTTCTAAAGTCTATCTTCTTGAGTTCTTTTATACAT
ATATATGTATGCATTGGATATTAGTCCCCCTATCTGATTTAGAACTGGTA
GACATTTTTTTCCCTATCTGGTGGGGGGCCTTTTTGGTTTTATTGGCTGC
GTTTTGCCTTACCCTACTTTTTTGTTCTTTATCAAGCCN

TGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTACTCAAGTTTAAGCACGGGAGGATTGATG
CCTTCATTCACATATCAAGATTGACTTCATGAAATTAGAGGCTTCATAGG
AACAGAGGAAGCTGTGGAAGACTTTTGAAAAATTATAATAAAGCTTCCTT
GATACATTGTAAATGTGAATGATTATCGTGTACCATGTAGATTTTAGATA
ACATTGAATTAGGTAAACATATGTGTCTTTTCCACAATTATTTATGTGTG
GTGTTAATTATAAGGCTTCAGGGGAAAAGGCAGACAGCAATACATTCACT
CACCTATCTCAAGTTAACAAAACTTAAGTTTGTATGAATATGATTACCTA
GCAGTTTCTCTAAAAGAAAAACACTGAGTGCTTTGTTCACATTATTTTAT
CCAGGAAATGAGGCCATCTCTTTCTACTTAGAGAAAGACAGTTTTTTATG
TCTGAAAAAAAAAAAAAAAAGACTCAACATAGTCAGAAAAATTGTTGCTG
ATTTTATCTAGCTACCTTAACAGTGAATCTTTGTGGGAAGTGTTTTGGAG
GAAATGATATAATTATATTACCCATCTCCAAATGTTANCATGGTATGTGC
ATTAAAAACGCCCCTATTCCATGTATTCTCCTAAGGGAAAAGCCCCTCCC
GACTCTTTAAACTATTTTTTAAAGGCATTATCTCC

Query= MSMg01no425_b17.g1 MSMg01no425_b17.g1 CHROMAT_FILE:
MSMg01no425_b17.g1 PHD_FILE: MSMg01no425_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:14 2005
         (465 letters)



>mm_chr11_28242153_28243015
          Length = 863

 Score =  884 bits (457), Expect = 0.0
 Identities = 463/465 (99%), Gaps = 2/465 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactcaagtttaagcacgggaggattgatgccttcattcacatatcaagattgacttcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tactcaagtttaagcacgggaggattgatgccttcattcacatatcaagattgacttcat 260

                                                                       
Query: 61  gaaattagaggcttcataggaacagaggaagctgtggaagacttttgaaaaattataata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaattagaggcttcataggaacagaggaagctgtggaagacttttgaaaaattataata 320

                                                                       
Query: 121 aagcttccttgatacattgtaaatgtgaatgattatcgtgtaccatgtagattttagata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcttccttgatacattgtaaatgtgaatgattatcgtgtaccatgtagattttagata 380

                                                                       
Query: 181 acattgaattaggtaaacatatgtgtcttttccacaattatttatgtgtggtgttaatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acattgaattaggtaaacatatgtgtcttttccacaattatttatgtgtggtgttaatta 440

                                                                       
Query: 241 taaggcttcaggggaaaaggcagacagcaatacattcactcacctatctcaagttaacaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaggcttcaggggaaaaggcagacagcaatacattcactcacctatctcaagttaacaa 500

                                                                       
Query: 301 aacttaagtttgtatgaatatgattacctagcagtttctctaaaagaaaaacactgagtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacttaagtttgtatgaatatgattacctagcagtttctctaaaagaaaaacactgagtg 560

                                                                       
Query: 361 ctttgttcacattattttatccaggaaatgaggccatctctttctacttagagaaagaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttgttcacattattttatccaggaaatgaggccatctctttctacttagagaaagaca 620

                                                        
Query: 421 gttttttatgtctgaaaaaaaaaaaaaaaagactcaacatagtca 465
           |||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 621 gttttt-atgtctgaaaaaaaaaaaaaaa-gactcaacatagtca 663


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 863
Length adjustment: 10
Effective length of query: 455
Effective length of database: 853
Effective search space:   388115
Effective search space used:   388115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)