Query= MSMg01no428_n10.b1 MSMg01no428_n10.b1 CHROMAT_FILE:
MSMg01no428_n10.b1 PHD_FILE: MSMg01no428_n10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:08 2005
(220 letters)
>mm_chr11_25436524_25437143
Length = 620
Score = 402 bits (208), Expect = e-117
Identities = 217/220 (98%)
Strand = Plus / Plus
Query: 1 tctatcactgggagggctcgggaaggttcttctaggacactctgagtaagaaagctgaaa 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 tctatcactgggagggctcgggaaggggcttctaggacactctgagtaagaaagctgaaa 260
Query: 61 ttcaagctaaaagtgactagcacagaatttgacctaacctctatcccttcctatctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaagctaaaagtgactagcacagaatttgacctaacctctatcccttcctatctctct 320
Query: 121 tccacttttctcatcttttgccaacttttaacaaaatctgtctttgtgtttctgtgaatt 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 tccacttttctcatcttttgccaacttttaacaaaatctggctttgtgtttctgtgaatt 380
Query: 181 tccacgcagagcctgaaaagctagtgaagaaaatggaagg 220
||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccacgcagagcctgaaaagctagtgaagaaaatggaagg 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_n10.g1 MSMg01no428_n10.g1 CHROMAT_FILE:
MSMg01no428_n10.g1 PHD_FILE: MSMg01no428_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:08 2005
(234 letters)
>mm_chr11_25605227_25605859
Length = 633
Score = 437 bits (226), Expect = e-127
Identities = 232/234 (99%), Gaps = 1/234 (0%)
Strand = Plus / Minus
Query: 1 attaattgagccactgaattgtgagagactagttatatagctatggcagggggaaatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 attaattgagccactgaattgtgagagactagttatatagctatggcagggggaaatgaa 374
Query: 61 aaagatgtcttttactcttttttttttaaatcaaagtgttataatggaaacagcaataaa 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aaagatgtcttttactc-tttttttttaaatcaaagtgttataatggaaacagcaataaa 315
Query: 121 ttagaatatgtttatgttttaaaaggaagacagcatatagatgtctgtattttgagaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 314 ttagaatatgtttatgttttaaaaggaagacagcatatagatgtctgtagtttgagaggg 255
Query: 181 tggagtggatttcttccagggaaatacaagatagtatataattcaagatcatgg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tggagtggatttcttccagggaaatacaagatagtatataattcaagatcatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 633
Length adjustment: 9
Effective length of query: 225
Effective length of database: 624
Effective search space: 140400
Effective search space used: 140400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
