Query= MSMg01no429_d14.b1 MSMg01no429_d14.b1 CHROMAT_FILE:
MSMg01no429_d14.b1 PHD_FILE: MSMg01no429_d14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:38 2005
(679 letters)
>mm_chr11_37895318_37896396
Length = 1079
Score = 1253 bits (648), Expect = 0.0
Identities = 669/676 (98%), Gaps = 2/676 (0%)
Strand = Plus / Plus
Query: 5 gaattcccatatctgtttctaaaaaccactctattgatcatctctgtgactctgtataca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccatatctgtttctaaaaaccactctattgatcatctctgtgactctgtataca 264
Query: 65 ttcattaatttctttttgaatagtggaaaattccttgttagatcagtaatgatatgaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcattaatttctttttgaatagtggaaaattccttgttagatcagtaatgatatgaaaa 324
Query: 125 ttgtactgcattatgtctaattcctaagctctctgtaaataataaaatgaaattgaagat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgtactgcattatgtctaattcctaagctctctgtaaataataaaatgaaattgaagat 384
Query: 185 gaatttacttttaatttatcttggatatcagtttaaaataataatattctactgatgatc 244
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 385 gaatttatttttaatttatcttggatatccgtttaaaataataatattctactgatgatc 444
Query: 245 cataaaggttgttttaatccagaattcaacaaaatagtttttaattccactaaagccact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cataaaggttgttttaatccagaattcaacaaaatagtttttaattccactaaagccact 504
Query: 305 gcaaacaattttcagtgtgtttgttaatcatggtgcaggtaatttctgtggagtactgga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcaaacaattttcagtgtgtttgttaatcatggtgcaggtaatttctgtggagtactgga 564
Query: 365 catttattttggtgtaagatatacaggaggagctttattagtccccaccaggttttgcca 424
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 565 catttattttggtgtaagatatacaggaggagctttattagaccccaccaggttttgcca 624
Query: 425 atacacctacgttaaggacatgctcatcaaatttcaaatttagactaactaattatcagt 484
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acacacctacgttaaggacatgctcatcaaatttcaaatttagactaactaattatcagt 684
Query: 485 atctggtatttttcttaaatcatactgactttttgattcaatgacttaaaaaacaaacat 544
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atctggaatttttcttaaatcatactgactttttgattcaatgacttaaaaaacaaacat 744
Query: 545 tacaaatgatagcaaatgctaacaaagtgtttaccatcggccagacttggtcatcaagtg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tacaaatgatagcaaatgctaacaaagtgtttaccatcggccagacttggtcatcaagtg 804
Query: 605 atcatggcatttgctggcagaggcctatagtggaatttcaaggata-anattcatatata 663
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 805 atcatggcatttgctggcagaggcctatagtggaatttcaaggataga-attcatatata 863
Query: 664 gtggatacaggaagtt 679
||||||||||||||||
Sbjct: 864 gtggatacaggaagtt 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_d14.g1 MSMg01no429_d14.g1 CHROMAT_FILE:
MSMg01no429_d14.g1 PHD_FILE: MSMg01no429_d14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:38 2005
(461 letters)
>mm_chr11_37952356_37953216
Length = 861
Score = 876 bits (453), Expect = 0.0
Identities = 459/461 (99%)
Strand = Plus / Minus
Query: 1 ttcattcacctctcatttggacaacttaacatcaagccattgaggcttatacctgtatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttcattcacctctcatttggacaacttaacatcaagccattgaggcttatacctgtatcc 602
Query: 61 aaggttactgtcttctattccttcagaacttttgtatagcatagatacatacttttcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaggttactgtcttctattccttcagaacttttgtatagcatagatacatacttttcatt 542
Query: 121 cctaatcagcagaaacaatagtgctgggaaaaaaggctgaacatactgtataaaggcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctaatcagcagaaacaatagtgctgggaaaaaaggctgaacatactgtataaaggcaaa 482
Query: 181 atatagccgactgctgggaacatgtcactgcaggcagaagcagttagatctgatggctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atatagccgactgctgggaacatgtcactgcaggcagaagcagttagatctgatggctgg 422
Query: 241 gagttcctctgatagttctccttaaataacttaattatttaatgagaagtgttttaattt 300
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgctcctctgatagttctccttaaataacttaattatttaatgagaagtgttttaattt 362
Query: 301 tttaagtgacataaaagatgagcttatagtatttacattgagattggatttactgactct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttaagtgacataaaagatgagcttatagtatttacattgagattggatttactgactct 302
Query: 361 gactttttatatgggagcagtaagtatgcaccaacctccacctcgtaagaaatctctctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gactttttatatgggagcagtaagtatgcaccaacctccacctcgtaagaaatctctctt 242
Query: 421 cacatcagaaaaaaacccaaacaaacaggtttttatgctct 461
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacatcagaaaaaaacccaaacaaacaggtttttatgctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
