Query= MSMg01no429_o02.b1 MSMg01no429_o02.b1 CHROMAT_FILE:
MSMg01no429_o02.b1 PHD_FILE: MSMg01no429_o02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:29 2005
(531 letters)
>mm_chr11_91855979_91856908
Length = 930
Score = 944 bits (488), Expect = 0.0
Identities = 521/532 (97%), Gaps = 3/532 (0%)
Strand = Plus / Plus
Query: 1 gtcttcctgaagaatgtcattcttgtggctattttgttattatcaaagaaaacaataatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtcttcctgaagaatgtcattcttgtggctattttgttattatcaaagaaaacaataatc 260
Query: 61 agtaaattttgtaaaaaaaatagtttaaaacacagaaaaatattaagctcaataatagca 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtaaattttgtaaaaaaa-tagtttaaaacacagaaaaatattaagctcaataatagca 319
Query: 121 cattagcatacaaaactatgtccatttaagcataaactaaataagttcagaggttgagtg 180
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 320 cattagcatataaaactatgtccattgaagcataaactaaataagttcagaggttgagtg 379
Query: 181 tttatattactgggattgtaggggaaaatgatctaaaacatttcaaaatctaaggctcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttatattactgggattgtaggggaaaatgatctaaaacatttcaaaatctaaggctcaa 439
Query: 241 atttgttaaattatcaggttcaatgttcgatgagaacaactcacatctgttacatttttt 300
|| ||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||
Sbjct: 440 atctgttaaattatcaggttcaatgttctatgagaacaactcatatctgtcacatttttt 499
Query: 301 ctttctgtgtatatgtaccgtgtatgcatatatgtgtgcaagtttccttgatttgatcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctttctgtgtatatgtaccgtgtatgcatatatgtgtgcaagtttccttgatttgatcat 559
Query: 361 atggaaccccaaagtagacatcaggggcttcttcctctggttgctgtattacattggata 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 560 atggaaccccaaagtagacatcaggggcttcttcctctggttgctgtattacattgaata 619
Query: 421 cagggtatctttctgagctgggaaatcattatcttggctagattggctagccaatgagct 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 620 cagggtatctttctgagctgggaaatcattatctttgctagattggctagccaatgagct 679
Query: 481 cccaagatactcctgacactctactctgtcctgaagttat-agacatggtca 531
|||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 680 cccaagatactcctgacactctactctgtcctgaagtt-tcagacatggtca 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 930
Length adjustment: 10
Effective length of query: 521
Effective length of database: 920
Effective search space: 479320
Effective search space used: 479320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_o02.g1 MSMg01no429_o02.g1 CHROMAT_FILE:
MSMg01no429_o02.g1 PHD_FILE: MSMg01no429_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:29 2005
(332 letters)
>mm_chr11_91984240_91984971
Length = 732
Score = 627 bits (324), Expect = 0.0
Identities = 330/332 (99%)
Strand = Plus / Minus
Query: 1 agtagaagttttcacagctaatcttcttgctattttcttcatgaatactttgcagatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 agtagaagttttcacagctaatcttcttgctattttcttcatgaatactttgcagatttc 473
Query: 61 tgcttatttggatccaaatattatcagatttaggagtataattttctaaaatgcaccgta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 472 tgcttatttggatccaaatattatcagatttaggagtataattttctaaaatgcactgta 413
Query: 121 ctattggatcaaaaatatgtatttaaagggtgtcagcacaatgacttgtgagtaaaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ctattggatcaaaaatatgtatttaaagggtgtcagcacaatgacttgtgagtaaaaatc 353
Query: 181 tgcctaatatcctgagctctatcccccagagccatagagtgaaaagaaagaactgatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgcctaatatcctgagctctatcccccagagccatagagtgaaaagaaagaactgatttc 293
Query: 241 tgcctgttgtcctttcactcccactaacatagtgtggaatgccatgactgtgagcacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tgcctgttgtcctttcactcccactaacatagtgtggaatgccatgactgtgagcacaaa 233
Query: 301 tgtgtacatgcatgctgacaaatgtaacagaa 332
|||||||||||||||||| |||||||||||||
Sbjct: 232 tgtgtacatgcatgctgataaatgtaacagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
