Query= MSMg01no430_g22.b1 MSMg01no430_g22.b1 CHROMAT_FILE:
MSMg01no430_g22.b1 PHD_FILE: MSMg01no430_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:16 2005
(423 letters)
>mm_chr11_29624241_29625058
Length = 818
Score = 609 bits (315), Expect = e-178
Identities = 371/411 (90%), Gaps = 35/411 (8%)
Strand = Plus / Minus
Query: 5 gaattctattgactgttgaaatgttcttcctacagcaagtatgtaatccagtccttaaga 64
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 376 gaattctattgactgttgaaatgttcttcctacagcaagtacggaatccagtccttaaga 317
Query: 65 gaaattatatcacaggctcagtagaagtttcagtaatactaagctactaaccacacctac 124
||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||
Sbjct: 316 gaaattatatcacaggctcagcagaagtttcagtaata-----ctactaaccacatctac 262
Query: 125 ctttttccacagttgatactaagactactgctctttttttcttaagagtgagaaccaggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttttccacagttgatactaagactactgctctttttttcttaagagtgagaaccaggg 202
Query: 185 gctggagagatgactcagcagttaagggcactgactggtcttccagaggtcctgagttca 244
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 gctggagagatgactcagcagttaagggcactgactgttcttccagaggtcc-------- 150
Query: 245 attcccagcaaccacatggtggctcgcaaccatctgtaatgggatctgatgccctcttct 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 -----cagcaaccacatggtggctcgcaaccatctgtaatgggatctgatgccctcttct 95
Query: 305 ggggtgtttgaagactgctatagtgtactcatatacataaaataaatatttaaaaagatt 364
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 ggggtgtttgaagactgctatagtgtactcatatacataaaataaa-------------- 49
Query: 365 aaaaaaagtaagtggtaaatggtaccacatacaaaaagctgccatagtaag 415
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 ---aaaagtaagtggtaaatggtaccacatacaaaaagctgccatagtaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 818
Length adjustment: 9
Effective length of query: 414
Effective length of database: 809
Effective search space: 334926
Effective search space used: 334926
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_g22.g1 MSMg01no430_g22.g1 CHROMAT_FILE:
MSMg01no430_g22.g1 PHD_FILE: MSMg01no430_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:16 2005
(392 letters)
>mm_chr11_29425535_29426326
Length = 792
Score = 719 bits (372), Expect = 0.0
Identities = 387/392 (98%)
Strand = Plus / Plus
Query: 1 agtgtgtgtatacaaataaaaaaaacaaaaattttttaaagaaaatgagtgtactgaggg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 201 agtgtgtgtatacaaataaaaaagacaaaaattttttaaagaaaatgagtggactgaggg 260
Query: 61 acctgagtttagggtagacattgagagataatggtaaagcgtgctttgggataagaaact 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctgagtttagggtagacaatgagagataatggtaaagcgtgctttgggataagaaact 320
Query: 121 tttctatgctattcccttaatctgtggtagtgctaggtgtaaacgagttaccctcaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctatgctattcccttaatctgtggtagtgctaggtgtaaacgagttaccctcaagag 380
Query: 181 atgatgatggctgtggccaaagaggagacaggaaaaactccaaagtgaagaaaaacaacg 240
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 atgatgatggctgtggccaaagaggagaccggaaaaactccaaagtgaagaaaaacaacc 440
Query: 241 aaaatcataacgaaaaacgtttacttgactcgtactctcaacaagtcactgaaaccttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatcataacgaaaaacgtttacttgactcgtactctcaacaagtcactgaaaccttcc 500
Query: 301 cacgatcttatgaagtccgtaccgtgattccatacaacagataaagtcgaggcacagagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacgatcttatgaagtccgtaccgtgattccatacaacagataaagtcgaggcacagagt 560
Query: 361 tgacaacacacctctaagttcacactgtgaac 392
||||||||||||||||||||||||||||||||
Sbjct: 561 tgacaacacacctctaagttcacactgtgaac 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
