Query= MSMg01no430_m14.b1 MSMg01no430_m14.b1 CHROMAT_FILE:
MSMg01no430_m14.b1 PHD_FILE: MSMg01no430_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:48 2005
(376 letters)
>mm_chr11_101250654_101251429
Length = 776
Score = 677 bits (350), Expect = 0.0
Identities = 369/382 (96%), Gaps = 12/382 (3%)
Strand = Plus / Plus
Query: 1 gtccctcttgatgtgtaaacattagctagcaacatttcttccagtgaacagtgcttgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtccctcttgatgtgtaaacattagctagcaacatttcttccagtgaacagtgcttgcct 260
Query: 61 tctggttgttaaatagtaactcacattcaagatacattactttaaaaatgctctgtatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctggttgttaaatagtaactcacattcaagatacattactttaaaaatgctctgtatac 320
Query: 121 caggctgaagatgtagcttagttggcggagtacttactgggtagattggaaactctgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggctgaagatgtagcttagttggcggagtacttactgggtagattggaaactctgggt 380
Query: 181 ctgatggtcagtgccatagaaaactaagtgatgacctgtaactaagcacttcgaggtaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgatggtcagtgccatagaaaactaagtgatgacctgtaactaagcacttcgaggtaga 440
Query: 241 ggcaggaggtc------tttttttcaaggtcacattagactgtctggcaagtttgaggcc 294
||||||||||| | |||||||||||||||||||||| |||||||||||||
Sbjct: 441 ggcaggaggtcacaaact------caaggtcacattagactgtctgtcaagtttgaggcc 494
Query: 295 agtttaagctacttgaaagcctgtctttggatagatagatagacagatagatagatagat 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agtttaagctacttgaaagcctgtctttggatagatagatagacagatagatagatagat 554
Query: 355 agatagatagatagatagatag 376
||||||||||||||||||||||
Sbjct: 555 agatagatagatagatagatag 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_m14.g1 MSMg01no430_m14.g1 CHROMAT_FILE:
MSMg01no430_m14.g1 PHD_FILE: MSMg01no430_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:49 2005
(246 letters)
>mm_chr11_101429435_101430080
Length = 646
Score = 462 bits (239), Expect = e-135
Identities = 246/251 (98%), Gaps = 5/251 (1%)
Strand = Plus / Minus
Query: 1 cataaatgaatcttcctgtggagtttaagctgctttttaagctctttgacctctgccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cataaatgaatcttcctgtggagtttaagctgctttttaagctctttgacctctgccttc 351
Query: 61 cgctgtttcttctcagcccgcaacctttgcttttctgctttcacaaagttcttgtccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cgctgtttcttctcagcccgcaacctttgcttttctgctttcacaaagttcttgtccacc 291
Query: 121 tgtttttggagcctgtgggataatgaatgaatgccttgaaacatttggcactgcaatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tgtttttggagcctgtgggataatgaatgaatgccttgaaacatttggcactgcaatcat 231
Query: 181 gtcaacaatgcatctagtttc-----tttcttttctttttttaaaaaagattttatttat 235
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 230 gtcaacaatgcatctagtttctttcttttcttttctttttttaaaaaagattttatttat 171
Query: 236 ttatgttatgt 246
|||||||||||
Sbjct: 170 ttatgttatgt 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
