XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCACAATATTACTTAGTTAATTACTATAACGGAATAAGACAAGAACAAAA
AGAGTAATAAGATAATTCATAATGATATCTATATACAGTTAAACATTTCA
CTATACAATCACAAAATATCAGATGCAGGCTTCTCTATGATGATAGAAGG
AATTATTTCCTTCACTTTTTAAAACATTGGGTTCACTTTACTCTTCTACT
AGATAAGATTTACGAGGCCAAATAACAGGGCTATAATAGCTTACTCATAG
CGTTCAACCCAATGAGTCTATTTGTACTTGACATACCTACAAAACACAAA
AACTGTAGCTCAACTCCAAAAAATCCTTTTTTCAAGTAATTTAGCAAAAA
TATACAAGCCTTCCCCCATGTGTACACCCATCACTTCAAAAAGAAGCAAC
TCTAGTCCATTTCCACAACAGACCACCTGCTATGATTTTTGCTGAAGAGC
AATGTCAACATTTAATCATCTTCTTCATCATCATCTTCACAGTCACCTGC
ACTACCACCACCATCTTCATCATCGCCATTCTTTTCTTTTTTAGCAGAAG
AATTTACATCTGCACTTCTGAACCTGTGGGACATGGTACTGTTTGAGGGT
TGTATATCAGATATCCTGCGGATCAGACATTCACGCTACATTTGATAACC
GCAGCTACATCTCTGTTCTTAACTCCGAAACTACT

CGAGAAGACAGAGAAGGCGCGCGGGGCGCGATCCGTTCCGGCGGCGCGGC
GTGATTAGTGGAGAGATCTCCCCGGCATAATAACGCTCTTCCGGCGTTCT
CTGCCATGTCCCTCGATTATCTTGTCACACACACTGTGAACGATACTATT
TTATTGTGCTGTTGGACGTTCCCATATTTTCGGTCATAGTGAGGCGGTAG
GTGGCGCCGGCCCATGCGGCGTCGGCGGTGAGGGGTCGGCGACCCGTGCG
TAGATACTCTCCATACCGTCTGTTTGGTGTATGTTCATCCAGTACGATGT
ACCGTCGATATATTACGCAGCGTGTTACAGACCCTCTCCGCGTCTGTTCG
CCGTCTATACGCGCTACTGTTCCGTGTACATGTGCATAGCATGCGCTGCC
ACCTCGTTCGTCGTCCTCGTGTGTACTCATAGACCGCCGGCGACTACTGA
TGGCCGGTCTCGCGTGTCTATTTTCTCTTACACATTACTTTACACTACTG
AGCACATCTCGTGACGCGGTTATTCCCTGTTTTATATATGTTTATGTGGC
CCGCGTTTAGCCCCTGTTGCGCCGGTTATCTCAATCTTGCGGCATCGCCC
TCCCTCTCCCGCGTGTTTCTATATTACGGCACGTGTGTATCGGATAAGCT
GGGTATACATCTCAGAATGAGCGTCGAGTCGCTCTAACGCGTAATATGAC
CACTACCAGTGCGCCGCGCGCGCGCGCCACCAGCATTTGCCCGCGTATTA
GCCGCGTTCATCGCGCCTGTGTTATGTGCGAGGTAATATGGCCAGGCTAG
CGACGCTATCTTTACTGATGGAACTCGTTATGTCGGTCNTAGACGTTAGA
TTGTCGGCGGCGCGCGATCCCATATGTTAGGCTATGCGCGAGGACTATAT
ATCTCTGTGTCTGCTCGCACCTATTCGCGTGCACGGCACACAGCTTTAAT
GTAGCTGCGCGCATTGTGGCAAGTGCAGTGTGCGTGGCGTATTGTCGTTG
TCGAGCATACTCGCCGTTGTCCAGCTACGTCGTGTGCTCACCGTATGTTA
CCGCAGCTTTTTGACCGCTATTAGCGCTGTCTCGCGCAGGTGCGGTGTCG
GAGCGCACTATTTATG

Query= MSMg01no431_m03.b1 MSMg01no431_m03.b1 CHROMAT_FILE:
MSMg01no431_m03.b1 PHD_FILE: MSMg01no431_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:12 2005
         (564 letters)



>mm_chr11_39171693_39172657
          Length = 965

 Score = 1021 bits (528), Expect = 0.0
 Identities = 557/568 (98%), Gaps = 4/568 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaattactataacggaataagacaagaacaaaaagagtaataagataattcataatgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaattactataacggaataagacaagaacaaaaagagtaataagataattcataatgat 260

                                                                       
Query: 61  atctatatacagttaaacatttcactatacaatcacaaaatatcagatgcaggcttctct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctatatacagttaaacatttcactatacaatcacaaaatatcagatgcaggcttctct 320

                                                                       
Query: 121 atgatgatagaaggaattatttccttcactttttaaaacattgggttcactttactcttc 180
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 atgatgatagaaggaattatttccttcactttttaaaacattgcgttcactttactcttc 380

                                                                       
Query: 181 tactagataagatttacgaggccaaataacagggctataatagcttactcatagcgttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tactagataagatttacgaggccaaataacagggctataatagcttactcatagcgttca 440

                                                                       
Query: 241 acccaatgagtctatttgtacttgacatacctacaaaacacaaaaactgtagctcaactc 300
           |||||||||| |||  |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 acccaatgaggctacatgtacttgacatgcctacaaaacacaaaaactgtagctcaactc 500

                                                                       
Query: 301 caaaaaatccttttttcaagtaatttagcaaaaatatacaagccttcccccatgtgtaca 360
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 caaaaaatccttttttcaagtaatttagcaaaaatatacaagccttaccccatgtgtaca 560

                                                                       
Query: 361 ccc-atcacttcaaaaagaagcaactctagtccatttccacaacagaccacctgctatga 419
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccccatcacttcaaaaagaagcaactctagtccatttccacaacagaccacctgctatga 620

                                                                       
Query: 420 tttttgctgaagagcaatgtcaacatttaatcatcttcttc---atcatcatcttcacag 476
           |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||
Sbjct: 621 tttttgctgaagagcaatgtcaacatttaatcatcttcttcttcatcatcatcttcacag 680

                                                                       
Query: 477 tcacctgcactaccaccaccatcttcatcatcgccattcttttcttttttagcagaagaa 536
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcacctgcactaccaccatcatcttcatcatcgccattcttttcttttttagcagaagaa 740

                                       
Query: 537 tttacatctgcacttctgaacctgtggg 564
           ||||||||||||||||||||||||||||
Sbjct: 741 tttacatctgcacttctgaacctgtggg 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 965
Length adjustment: 10
Effective length of query: 554
Effective length of database: 955
Effective search space:   529070
Effective search space used:   529070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)