Query= MSMg01no432_h03.b1 MSMg01no432_h03.b1 CHROMAT_FILE:
MSMg01no432_h03.b1 PHD_FILE: MSMg01no432_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:10 2005
(458 letters)
>mm_chr11_92645101_92645958
Length = 858
Score = 843 bits (436), Expect = 0.0
Identities = 451/456 (98%), Gaps = 2/456 (0%)
Strand = Plus / Minus
Query: 4 ggaattccactgacttctgtaagcaatacaccatagttgtgcaatgctgacattattatt 63
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ggaattccactgacttctgtacgcaatacaccatagttgtgcaatgctgacattattatt 599
Query: 64 ccttccaatttatatgtgagaaaaaaatggtttcaatgacttgactgtattaatagtaat 123
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 598 ccttccaatttatatgtgag-aaaaaatggtttcaatgacttgactgtattaacagtaat 540
Query: 124 aagtcatgaaacttaaacctgggtctgccctggttgttcatttaattattctactgtaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aagtcatgaaacttaaacctgggtctgccctggttgttcatttaattattctactgtaat 480
Query: 184 cagttatggtgctgtgtttcttaagctcaatactgttcagaaatgttattaacataccag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cagttatggtgctgtgtttcttaagctcaatactgttcagaaatgttattaacataccag 420
Query: 244 tatcttgataatagtttagcaactttgatttggctagtactaattacagaactgtagggt 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 419 tatcttgataatagtttagcaactttgatttggttagtactaattacagaactgtagggt 360
Query: 304 gcctggactctcaaccttgagcccagcatgtcacagaaactgtcctgaagacagcttctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gcctggactctcaaccttgagcccagcatgtcacagaaactgtcctgaagacagcttctt 300
Query: 364 taagcatgtaccatacagtgagatttggcccttctggcatgtttcctgtaattacttgat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 taagcatgtaccatacagtgagatttggcccttctggcatgtttcctgtaattacttgat 240
Query: 424 ttaattaaagcaattctatc-atctgcattgaaccc 458
|||||||||||||||||||| |||||||||||||||
Sbjct: 239 ttaattaaagcaattctatcgatctgcattgaaccc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_h03.g1 MSMg01no432_h03.g1 CHROMAT_FILE:
MSMg01no432_h03.g1 PHD_FILE: MSMg01no432_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:10 2005
(371 letters)
>mm_chr11_92530801_92531571
Length = 771
Score = 692 bits (358), Expect = 0.0
Identities = 367/370 (99%), Gaps = 1/370 (0%)
Strand = Plus / Plus
Query: 1 aaagaactaattaaatgaaattttcattctcaataaaattattggacatttattctgtaa 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 aaagaactaattaaatgaaattttcattctcaataaaattattggaaatttattctgtaa 260
Query: 61 tgtcttttcatggataatagcttttaaattatgtttaggatggaactccgtgcacaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtcttttcatggataatagcttttaaattatgtttaggatggaactccgtgcacaagat 320
Query: 121 ctgaagatgatcaaatcaaccaaaataagagcttggataggggagggctcctaaggtcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaagatgatcaaatcaaccaaaataagagcttggataggggagggctcctaaggtcct 380
Query: 181 acacccagctgaggagctattgtcaattgatggttactaatggaggatagaataagttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacccagctgaggagctattgtcaattgatggttactaatggaggatagaataagttaa 440
Query: 241 ctccagggatatggtccataaaaggctacccatgctctcacagatgcccccaaacctata 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttcagggatatggtccataaaaggctacccatgctctcacagatgcccccaaacctata 500
Query: 301 aaatcaatcctaagtcgagttaacaggttaaaatatatagcacatgaaatggagtggggg 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 aaatcaatcctaagtcgagttaacaggttaaaatatatagca-atgaaatggagtggggg 559
Query: 361 taagtggttg 370
||||||||||
Sbjct: 560 taagtggttg 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
