Query= MSMg01no432_h08.b1 MSMg01no432_h08.b1 CHROMAT_FILE:
MSMg01no432_h08.b1 PHD_FILE: MSMg01no432_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:11 2005
(508 letters)
>mm_chr11_99973191_99974100
Length = 910
Score = 938 bits (485), Expect = 0.0
Identities = 498/503 (99%), Gaps = 2/503 (0%)
Strand = Plus / Plus
Query: 8 gaattccacagcattgccttttctccccagcgtgtttgagaacctgtggtttatgggaga 67
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattccacagcattgctttttctccccagcgtgtttgagaacctgtggtttatgggaga 267
Query: 68 tgccctgtcaggcatactgggacagggacttcagtgtccgagtccactcctttcaagtat 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tgccctgtcaggcatactgggacagggacttcagtgtccgagtccactcctttcaagtat 327
Query: 128 cacttcattgaaccacaaagcaaat--cccccccaaaaatcaccccatttgattggctca 185
||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 328 cacttcattgaaccacaaagcaaatcccccccccaaaaaacaccccatttgattggctca 387
Query: 186 gcggtcagcatttacagatgctgtgcagtccacataacaacacccctcctggtaacaaca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gcggtcagcatttacagatgctgtgcagtccacataacaacacccctcctggtaacaaca 447
Query: 246 gccagtctgtggccaggcccgggactccaggctgtcattaactatcctgcattctgcaga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gccagtctgtggccaggcccgggactccaggctgtcattaactatcctgcattctgcaga 507
Query: 306 tttgactttcaagcttctctgagatgctcagatgaaagcagccacagggctgttacgagc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tttgactttcaagcttctctgagatgctcagatgaaagcagccacagggctgttacgagc 567
Query: 366 gatcgtgaaagttggccagagaatgtgtgccagacacccgccagctttcccaaaagccca 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gatcgtgaaagttggccagagaatgtgtgccagacacccgccagctttcccaaaagccca 627
Query: 426 tccccaacaggtgcctgaaagagtctcagcagctaaccagccacctgtatcaccctccca 485
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 628 tccccaacaggtgcctgaaagagtctcagcagccaaccagccacctgtatcaccctccca 687
Query: 486 aactccatgtagggacacagtgc 508
|||||||||||||||||||||||
Sbjct: 688 aactccatgtagggacacagtgc 710
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 910
Length adjustment: 10
Effective length of query: 498
Effective length of database: 900
Effective search space: 448200
Effective search space used: 448200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_h08.g1 MSMg01no432_h08.g1 CHROMAT_FILE:
MSMg01no432_h08.g1 PHD_FILE: MSMg01no432_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:11 2005
(418 letters)
>mm_chr11_100110628_100111443
Length = 816
Score = 681 bits (352), Expect = 0.0
Identities = 401/418 (95%), Gaps = 2/418 (0%)
Strand = Plus / Minus
Query: 1 ccttctactgaatccatagcagagcaagggggtgcccctgcgtgggtgagggcaggaggt 60
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 616 ccttctactgaatccacagcagagcaagggggtgtccctgagtgggtgagggcaggaggt 557
Query: 61 ggcacggaggagctgtggctgggcactctcttagtgcaggggtcttatgttaggagtcag 120
|||| |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 556 ggcatggaggagctgtggctgggcattctcttagtgcaggggttttacgttaggagtcag 497
Query: 121 aatatggaggttggatcgaaaagcagcaaggctgcagagggaggatggagaggctgacca 180
||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 496 aatgtaaaggttggatcgaaaagcagcaaggttgcagagggaggatggagaggctgacca 437
Query: 181 cagggatagggtcctgcaggcatgcttctttgtgacttgtatgtgtcctaaaagaactga 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cagggaaagggtcctgcaggcatgcttctttgtgacttgtatgtgtcctaaaagaactga 377
Query: 241 ggcccagaaggatgtcaaggtcctctgtactgggcagtgagtgagaggcagggtgggtct 300
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 376 ggcccagaaggatgacaaggtcctctgtactgggcagtgagtgagaggca--gtgggtct 319
Query: 301 gtggcagcatagtgtgtggatgctatggtggacaccactctggacatcctggtgtctcat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtggcagcatagtgtgtggatgctatggtggacaccactctggacatcctggtgtctcaa 259
Query: 361 aggcagcttccaaatgctaactagatcctatgggaatggaaacctctgattttttaga 418
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aggcagcttccaaatgcaaactagatcctatgggaatggaaacctctgattttttaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 816
Length adjustment: 9
Effective length of query: 409
Effective length of database: 807
Effective search space: 330063
Effective search space used: 330063
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
