Query= MSMg01no434_n02.b1 MSMg01no434_n02.b1 CHROMAT_FILE:
MSMg01no434_n02.b1 PHD_FILE: MSMg01no434_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:20 2005
(259 letters)
>mm_chr11_20413578_20414235
Length = 658
Score = 474 bits (245), Expect = e-138
Identities = 254/257 (98%), Gaps = 1/257 (0%)
Strand = Plus / Plus
Query: 1 gcagcgttgatggcagcagctggggagaggtgtagggatttactgtctcttcttgctgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcagcgttgatggcagcagctggggagaggtgtagggatttactgtctcttcttgctgga 260
Query: 61 gagatagtggttcactgtgcagccttgggtggcctgagctcacaatggtctttttgctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagatagtggttcactgtgcagccttgggtggcctgagctcacaatggtctttttgctcc 320
Query: 121 aactctggtgtactgtggtgctaggaatttggacaccacgcctggcctggaaagtgagca 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 aactctggtgtactgtggtgctaggaatttg-acaccacgcctggcctggaaagtgagca 379
Query: 181 ggttcctacagatcgaggagtagatcatgctgtgtgcttggctgggtcttggtcacttga 240
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 380 ggttcctacagatcgaggagcagatcgtgctgtgtgcttggctgggtcttggtcacttga 439
Query: 241 catttaaaacctatatt 257
|||||||||||||||||
Sbjct: 440 catttaaaacctatatt 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 658
Length adjustment: 9
Effective length of query: 250
Effective length of database: 649
Effective search space: 162250
Effective search space used: 162250
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no434_n02.g1 MSMg01no434_n02.g1 CHROMAT_FILE:
MSMg01no434_n02.g1 PHD_FILE: MSMg01no434_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:20 2005
(436 letters)
>mm_chr11_20596202_20597038
Length = 837
Score = 830 bits (429), Expect = 0.0
Identities = 435/437 (99%), Gaps = 1/437 (0%)
Strand = Plus / Minus
Query: 1 caagctagtggaggttccactctcctgaaccttgatttctttgggcccgtggatgacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 caagctagtggaggttccactctcctgaaccttgatttctttgggcccgtggatgacagt 578
Query: 61 agctctagcagcagcacaatcccaggtcagcagagcgtttaaccatagttgtggttactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 577 agctctagcagcagcacaatcccaggtcagcagagcgtttaaccatagttgtgattactt 518
Query: 121 actaaaagcatgacgacgtttgactttcctataaacaagcaaacaggtagacggtgttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 actaaaagcatgacgacgtttgactttcctataaacaagcaaacaggtagacggtgttct 458
Query: 181 -cccactgcctttccttcatccagcgtcctttctgacagctgatggcaagaaactactta 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ccccactgcctttccttcatccagcgtcctttctgacagctgatggcaagaaactactta 398
Query: 240 cacaaaatacagttctaaggaaaatttctcagagggttatattcagagctgaaagcagtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cacaaaatacagttctaaggaaaatttctcagagggttatattcagagctgaaagcagtt 338
Query: 300 tctgcaataatatgaccctaatggctttagacagctaaggatgttttggttttcacccac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tctgcaataatatgaccctaatggctttagacagctaaggatgttttggttttcacccac 278
Query: 360 tctaaatggaaaatgtatttatatgcttattttgaaagcatattctataaagccatttga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tctaaatggaaaatgtatttatatgcttattttgaaagcatattctataaagccatttga 218
Query: 420 aaatagcactagcgaga 436
|||||||||||||||||
Sbjct: 217 aaatagcactagcgaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 837
Length adjustment: 9
Effective length of query: 427
Effective length of database: 828
Effective search space: 353556
Effective search space used: 353556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
