XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCA
AAGTGCATTCACCAAATAGCCAAGATCCAACACACAGCTTTGGGCATTTT
GCAAAATAGTTACTCTGTTAATAAAACTATACTTGTAGGCAAGACTAATC
TTAGTTAACTAGGCAAGACTAATCAACCAAGCAATTGTTGAGAAAGGGTC
TTGGACCTTTTGACCCCAGACAGCAGGTTTACTTAAATGTGAGAAGAGCA
GAAAGGGTAAGACAGTGAAAGCAGAAACCCTTTATCCAGCATTCTACCTC
CCCAAGAAGCAAGAATCACTTATCATTAGCTTGAATAGCTGCAGAAATAT
TTTCACTGAGGCACTTATATACATTAAGCATGTCTAAATAAATTCTGCCA
AGCTGAATTACAAAGGGATGACCAACAGCTTTGCAGGCTCTCACATTTGT
TTTTAATATGCTACCCAGCTGCTTGACTGTTTCAGGATCTTTCAGGATAT
CCACATTCTGAAATTATCACAATAAAGCACAACCTCATTTATTGAAAACT
TCATCTTATTTGAAATCTCAAAAGACAACACAAGGCCTGGGTTATAGCTC
AGTCCTAAGATATTTTACAAACAGGCGGTGCCCAGCTTAATCTACCCAAA
GCTCANGTACTTATAAACCTAAAGAGTGAAGTGAAACAGTCTCACCTAAG
TAAGATCCAACCGAATGTGTGGTGGCTTGGCAGCG

ATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXACAGAGGCAGCCTTTGCTTTGTAAAATGGA
GCCACTCAGGGTAAGTGTCCTAGTTAGAATTACTATGGCTGTGATGAACA
AAAGCAAGTTGGGAAGGAAAGGGTTTACACATCCTCAAAGCATGTCAGGC
CAGTAAGGAAACAGGGTAGGAACTTGCTGGCAGGAGCTGATGCAGAGGTC
ATGAAGGGTCTTGCTCCATCTGCTTTCTTACAGAACCTAGGACCATCAAA
CCCCATTGTGGGATGGTACCACTCACAGTGGACAGGGCCCTCCCCCATCA
ATTACTAATTAAGTAAATGTCTTATGGGGTTGTATACAGTCCAATCTTAT
GGAAACATTTTCTCAGTTATGGCTACCTCCTTTCCAATGACTCTAGCTTA
CCTCTAGTTGACATAAAACTAGCCAGCTCGGTAAGGTAAAGCTTGAAAAT
CAGTTTCACACAGCTTAGAGCAGGACACAGCCTACTCACCAGGATGTGCA
TCATTTCTTCCAAGGAAGTACCCCATTCTCATTGACAGGGATATTTCTCT
AAACTGTTCTGAAATAAAAAAGACCAGCCCGGGATTTACCCTTTTCCAAG
GAGGGGGCCCCGAACCTAAAAAGGCTAAGGGTATTTGGTCCTTGAAAAAC
CCTTCCAAAAAAAAAAAGAAGCTCTATAAATTTCCTTCCCCCAGGAGACG
GCCCATTT

Query= MSMg01no434_n24.b1 MSMg01no434_n24.b1 CHROMAT_FILE:
MSMg01no434_n24.b1 PHD_FILE: MSMg01no434_n24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:25 2005
         (530 letters)



>mm_chr11_23186480_23187410
          Length = 931

 Score =  988 bits (511), Expect = 0.0
 Identities = 523/527 (99%), Gaps = 1/527 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaaagtgc-attcaccaaatagccaagatccaacacacagctttgggcattttg 63
           |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gaattccaaagtgcaaaccaccaaatagccaagatccaacacacagctttgggcattttg 672

                                                                       
Query: 64  caaaatagttactctgttaataaaactatacttgtaggcaagactaatcttagttaacta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 caaaatagttactctgttaataaaactatacttgtaggcaagactaatcttagttaacta 612

                                                                       
Query: 124 ggcaagactaatcaaccaagcaattgttgagaaagggtcttggaccttttgaccccagac 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ggcaagactaatcaaccaagcaattgttgagaaagggtcttggaccttttgaccccagac 552

                                                                       
Query: 184 agcaggtttacttaaatgtgagaagagcagaaagggtaagacagtgaaagcagaaaccct 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 agcaggtttacttaaatgtgagaagagcagaaagggtaagacagtgaaagcagaaaccct 492

                                                                       
Query: 244 ttatccagcattctacctccccaagaagcaagaatcacttatcattagcttgaatagctg 303
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 491 ttatccagcattctacctccccaagaagcaagaatcacttaccattagcttgaatagctg 432

                                                                       
Query: 304 cagaaatattttcactgaggcacttatatacattaagcatgtctaaataaattctgccaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cagaaatattttcactgaggcacttatatacattaagcatgtctaaataaattctgccaa 372

                                                                       
Query: 364 gctgaattacaaagggatgaccaacagctttgcaggctctcacatttgtttttaatatgc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gctgaattacaaagggatgaccaacagctttgcaggctctcacatttgtttttaatatgc 312

                                                                       
Query: 424 tacccagctgcttgactgtttcaggatctttcaggatatccacattctgaaattatcaca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tacccagctgcttgactgtttcaggatctttcaggatatccacattctgaaattatcaca 252

                                                          
Query: 484 ataaagcacaacctcatttattgaaaacttcatcttatttgaaatct 530
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ataaagcacaacctcatttattgaaaacttcatcttatttgaaatct 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 931
Length adjustment: 10
Effective length of query: 520
Effective length of database: 921
Effective search space:   478920
Effective search space used:   478920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)