Query= MSMg01no435_d09.b1 MSMg01no435_d09.b1 CHROMAT_FILE:
MSMg01no435_d09.b1 PHD_FILE: MSMg01no435_d09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:51 2005
(473 letters)
>mm_chr11_26512269_26513141
Length = 873
Score = 814 bits (421), Expect = 0.0
Identities = 447/457 (97%), Gaps = 3/457 (0%)
Strand = Plus / Plus
Query: 20 aatcactctaattttgacaatgacagggctgttgttgattaaagccaagctagttacttt 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 aatcactctaattttgacaatgacagggctgttgttgattaaagccaagctagttacttt 276
Query: 80 tgccttcaaatactagtagaagtttctttggtgaatactgaaacttagggctggacatgg 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tgccttcaaatactagtagaagtttctttggtgaatactgaaacttagggctggacatgg 336
Query: 140 agcttagctggtaggctacttgcctagcacatgcaaaaacccagttcttccccagcacca 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agcttagctggtaggctacttgcctagcacatgcaaaaacccagttcttccccagcacca 396
Query: 200 ctggacctgatggtacatacccacaatctcaggatttgagaggcagaagaggaaagatca 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctggacctgatggtacatacccacaatctcaggatttgagaggcagaagaggaaagatca 456
Query: 260 tgagttcatagattgtcatgggtatatactgtgaacctatgagtgtgaagtctgcccaga 319
||||||| ||| |||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 457 ggagttcaaagacagtcatgggtatatactgtgaacctatgagtgtgaggtcttcccaga 516
Query: 320 atacatgagacatgattttttttttt---aatttgaacctcggatctatttgaaaggatt 376
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 517 atacatgagacatggttttttttttttttaatttgaacctcggatctatttgaaaggatt 576
Query: 377 taaagctacatggtcccatctaagtaatgatatatatagagagaggaagatcagagcctg 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 taaagctacatggtcccatctaagtaatgatatatatagagagaggaagatcagagcctg 636
Query: 437 ccagggttccattccagggaacaatgtgaggagaccc 473
|||||||||||||||||||||||||||||||||||||
Sbjct: 637 ccagggttccattccagggaacaatgtgaggagaccc 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_d09.g1 MSMg01no435_d09.g1 CHROMAT_FILE:
MSMg01no435_d09.g1 PHD_FILE: MSMg01no435_d09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:51 2005
(426 letters)
>mm_chr11_26678623_26679448
Length = 826
Score = 787 bits (407), Expect = 0.0
Identities = 413/415 (99%)
Strand = Plus / Minus
Query: 1 agaagagatggtatctcacatttatagcactaagttgtggaggaagggttcctgtgcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 agaagagatggtatctcacatttatagcactaagttgtggaggaagggttcctgtgcctt 359
Query: 61 aattaaatattaatgatttgcttaaagagcaatgatgtttgttacaagaatattttgtgg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 358 aattaaatattaatgatttgcttaaagagcaatgaggtttgttacaagaatattttgtgg 299
Query: 121 tagacaaataacttatgctggaaatttcagagaaaggtcaagcaatcatacttgtaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tagacaaataacttatgctggaaatttcagagaaaggtcaagcaatcatacttgtaattc 239
Query: 181 ctttagataaagagggaaacacatttatctttttggagtattgtgagcgaaatacatatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ctttagataaagagggaaacacatttatctttttggagtattgtgagcgaaatacatatg 179
Query: 241 tcctccaaaaatttatatgttgaaatcctaatccctaatgtgctgataggagacggaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tcctccaaaaatttatatgttgaaatcctaatccctaatgtgctgataggagacggaacc 119
Query: 301 tttgagacaaaaatcacaagactgcagctctcataaatgcgattggtacccatctaaaag 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 118 tttgagacaaaaatcacaagactgcagctctcataaatgtgattggtacccatctaaaag 59
Query: 361 ggacttcatagatctcttaactcttcttccatgtgagaatactccacgaaaaaaa 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 ggacttcatagatctcttaactcttcttccatgtgagaatactccacgaaaaaaa 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
