Query= MSMg01no437_h16.b1 MSMg01no437_h16.b1 CHROMAT_FILE:
MSMg01no437_h16.b1 PHD_FILE: MSMg01no437_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:53 2005
(468 letters)
>mm_chr11_6061357_6062221
Length = 865
Score = 882 bits (456), Expect = 0.0
Identities = 461/464 (99%), Gaps = 3/464 (0%)
Strand = Plus / Plus
Query: 5 gaattccatggaatctttcaataaacaggcagtaatgaaacaaatgtcagaaagtcagct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatggaatctttcaataaacaggcagtaatgaaacaaatgtcagaaagtcagct 264
Query: 65 ttgacaagaatgtttacttacactgctgacaaaaagcaattagttcttggcttagaaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgacaagaatgtttacttacactgctgacaaaaagcaattagttcttggcttagaaaga 324
Query: 125 gcctttaacaaggagacagtttgctgtagggctatttcattccctgagaacagacctgtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcctttaacaaggagacagtttgctgtagggctatttcattccctgagaacagacctgtt 384
Query: 185 gtgagtgaatctgaaagtccatctgttaatgcccatgtgggatgacagtcccagcaagtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgagtgaatctgaaagtccatctgttaatgcccatgtgggatgacagtcccagcaagtt 444
Query: 245 caacagccatgatcttaacctgccagagacaaagcaaaaaactccaaaaaaaaaaaaaaa 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caacagccatgatcttaacctgccagagacaaagcaaaaaactccaaaaaaaaaaaa--- 501
Query: 305 ttaacaggcttctttaactggtagaagaggctctagtaagtgctttctctagagcctcca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttaacaggcttctttaactggtagaagaggctctagtaagtgctttctctagagcctcca 561
Query: 365 cacatttgcatctgctatgattttaatatgccctctaaaattcagagagtggccatttaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cacatttgcatctgctatgattttaatatgccctctaaaattcagagagtggccatttaa 621
Query: 425 tagttggtatgatgctacaaaaggtgattaagccattaaggctc 468
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tagttggtatgatgctacaaaaggtgattaagccattaaggctc 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 865
Length adjustment: 10
Effective length of query: 458
Effective length of database: 855
Effective search space: 391590
Effective search space used: 391590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_h16.g1 MSMg01no437_h16.g1 CHROMAT_FILE:
MSMg01no437_h16.g1 PHD_FILE: MSMg01no437_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:53 2005
(464 letters)
>mm_chr11_6206277_6207144
Length = 868
Score = 739 bits (382), Expect = 0.0
Identities = 424/448 (94%), Gaps = 18/448 (4%)
Strand = Plus / Minus
Query: 1 acagaatgcacagagcatacaatgctgaggagagatggcacccatttaaaggccaactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 acagaatgcacagagcatacaatgctgaggagagatggcacccatttaaaggccaactca 376
Query: 61 ggccccaaggcttgt-----agaacaggtggggacctacaggagctgaaggtagaacaac 115
||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 375 ggccccaaggcttgtagaacagaacaggt-gggacctatgggagctgaaggtaaaacaac 317
Query: 116 aaatcccatgctgaagaacactgaatagatacatcaggaagggaagatggtgttggaaga 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaatcccatgctgaagaacactgaatagatacatcaggaagggaagatggtgttggaaga 257
Query: 176 accagaccaggaggctatgctgaaagctggtctcaagacacaatacttaggggcacatgg 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 accagaccaggaggctatgctgaaagctggtctcaagacacaatacttaggggc------ 203
Query: 236 ttatctacctcgtgggaagccagcactgaacactggataacctttgccacccaatgctaa 295
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 202 ------acctcgtgggaagccagcactgaacactggataacttttgccacccaatgctaa 149
Query: 296 caggagggagcctgcagaagaggggcttgtatcttcctgccgaccctaagtgggcttacg 355
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 148 caggagggagcctgcagaagaggggcttgtatcttcctgccaaccctaagtgggcttaca 89
Query: 356 gtcataacctttctgccaggataacttaggacagatttcaagtgcaaataattttaatac 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gtcataacctttctgccaggataacttaggacagatttcaagtgcaaataattttaatac 29
Query: 416 tatggttgaaataaaatgaaatgtgagc 443
||||||||||||||||||||||||||||
Sbjct: 28 tatggttgaaataaaatgaaatgtgagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 868
Length adjustment: 10
Effective length of query: 454
Effective length of database: 858
Effective search space: 389532
Effective search space used: 389532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
