Query= MSMg01no437_p12.b1 MSMg01no437_p12.b1 CHROMAT_FILE:
MSMg01no437_p12.b1 PHD_FILE: MSMg01no437_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:33 2005
(477 letters)
>mm_chr11_107788806_107789680
Length = 875
Score = 862 bits (446), Expect = 0.0
Identities = 465/476 (97%), Gaps = 10/476 (2%)
Strand = Plus / Minus
Query: 6 aattccaattta----tgccccttggaagacaagcaccatccgaagcaaaccaggcagag 61
|||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aattccaatttaggttt----cttggaagacaagcaccatccgaagcaaaccaggcagag 620
Query: 62 cccttcttgacttttacaaaattccctggtctttcttggctggattcagtgcactttttt 121
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 619 cccttcttgacttttacaaaattccctggtctttcttggctggattcaatgcac--tttt 562
Query: 122 ttttttacttctattttcagtttttgatggatctacagggatgttaccccatcagaagtt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttttacttctattttcagtttttgatggatctacagggatgttaccccatcagaagtt 502
Query: 182 gagagcatttgtatagtaggcatcaaaagtttgagaaatactggttggagagatggttcc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagagcatttgtatagtaggcatcaaaagtttgagaaatactggttggagagatggttcc 442
Query: 242 acagttaagagcatttgatgtatttgcgttaattatatgtaatttaaaatgtattctgaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagttaagagcatttgatgtatttgcgttaattatatgtaatttaaaatgtattctgaa 382
Query: 302 cctacgggaacagtgagctttgctttttgacagatgagtcatttcaaggttcacttgtgc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctacgggaacagtgagctttgctttttgacagatgagtcatttcaaggttcacttgtgc 322
Query: 362 agacacacacagcatacacactctatgtcctcgcagctcacactagttaccacgtactgc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agacacacacagcatacacactctatgtcctcgcagctcacactagttaccacgtactgc 262
Query: 422 agccgtgaggtgctgcataactaattatcctgacacttatctacatcaatagctgt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccgtgaggtgctgcataactaattatcctgacacttatctacatcaatagctgt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 875
Length adjustment: 10
Effective length of query: 467
Effective length of database: 865
Effective search space: 403955
Effective search space used: 403955
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_p12.g1 MSMg01no437_p12.g1 CHROMAT_FILE:
MSMg01no437_p12.g1 PHD_FILE: MSMg01no437_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:33 2005
(437 letters)
>mm_chr11_107622799_107623635
Length = 837
Score = 783 bits (405), Expect = 0.0
Identities = 429/437 (98%)
Strand = Plus / Plus
Query: 1 tctagaaccatagttcccggcctctatgctcccctgaagaattctccagaagaggaagga 60
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tctagaaccatagttcctggcctctatgctcccccgaagaattctccagaagaggaagga 260
Query: 61 ggtagagggggcagtgttggagggagggcacatacctgccaagtcactggcactttccgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ggtagagggggcagtgttggagggagggcacatacctgccaagtcactggcaccttccgg 320
Query: 121 cagtcaggcaaaactgagatagctcagatctgctcaccgagtacacctggggctggggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtcaggcaaaactgagatagctcagatctgctcaccgagtacacctggggctggggca 380
Query: 181 gcaatttcagccaaatagaaaccaaattcaaacttgatgttcaatccctgcccccgacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaatttcagccaaatagaaaccaaattcaaacttgatgttcaatccctgcccccgacac 440
Query: 241 ctgtggtctttattgccaagtaaacacagttatcagctggagcctggctgcctacctgtc 300
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtggtccagagtgccaagtaaacacagttatcagctggagcctggctgcctacctgtc 500
Query: 301 ctttggaggagagccaccagcttcatagacttggatgagacctcagagctctgggctcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttggaggagagccaccagcttcatagacttggatgagacctcagagctctgggctcat 560
Query: 361 cagccacacctgatgcccatgtcctctgtcctggcctcctgggaaccccacatcctgaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 cagccacacctgatgcccatgtcctctgtcctggcctcctgggaaccccacgtcctgaca 620
Query: 421 gtgtctgcccgttggcc 437
|||||||||||||||||
Sbjct: 621 gtgtctgcccgttggcc 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
