Query= MSMg01no439_f13.b1 MSMg01no439_f13.b1 CHROMAT_FILE:
MSMg01no439_f13.b1 PHD_FILE: MSMg01no439_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:26 2005
(482 letters)
>mm_chr11_69794866_69795747
Length = 882
Score = 901 bits (466), Expect = 0.0
Identities = 478/482 (99%)
Strand = Plus / Minus
Query: 1 ggaggagctccttcacacccaaggcttttcctcaagttccaattcctgctccatatgccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ggaggagctccttcacacccaaggcttttcctcaagttccaattcctgctccatatgccc 623
Query: 61 ttctacccacccacaccactgacaaaggagtctgactttcaacaggagggtctttccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttctacccacccacaccactgacaaaggagtctgactttcaacaggagggtctttccaaa 563
Query: 121 gcccgtatcaatagttctggctaccagcaaacaggtgttcccggcctcttctttctttag 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gcccatatcaatagttctggctaccagcaaacaggtgttcccggcctcttctttctttag 503
Query: 181 caacaactctagctttcgtaaggagagcaccattctagcccccgagaactgccaaatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 caacaactctagctttcgtaaggagagcaccattctagcccccgagaactgccaaatcct 443
Query: 241 atcccatttatgcttattaagaaagaaagcaaacccagtaaaaatcatggttcttttatt 300
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atcccatttaggcagattaagaaagaaagcaaacccagtaaaaatcatggttcttttatt 383
Query: 301 aagggctgaaccttgcttaaaggtgtcctacttctccagcgggtaaagctctggccaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aagggctgaaccttgcttaaaggtgtcctacttctccagcgggtaaagctctggccaagg 323
Query: 361 ctcccttcctaggcccaaagcagaggcccagcactatccaaaattccgcgagcaccgcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctcccttcctaggcccaaagcagaggcccagcactatccaaaattccgcgagcaccgcgg 263
Query: 421 acagaggaccccaccactggcagcacccaagcaaactcaccgtgcggatctgcctccgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 acagaggaccccaccactggcagcacccaagcaaactcaccgtgcggatctgcctccgca 203
Query: 481 aa 482
||
Sbjct: 202 aa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_f13.g1 MSMg01no439_f13.g1 CHROMAT_FILE:
MSMg01no439_f13.g1 PHD_FILE: MSMg01no439_f13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:27 2005
(207 letters)
>mm_chr11_69608125_69608732
Length = 608
Score = 364 bits (188), Expect = e-105
Identities = 203/208 (97%), Gaps = 1/208 (0%)
Strand = Plus / Plus
Query: 1 aatttgttgatcgaaaattctgtttcagttattatatgtgtacgttgtgagttactatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatttgttgatcgaaaattctgtttcagttattatatgtgtacgttgtgagttactatta 260
Query: 61 aaaaaaa-tcttactgggatgaggactccaggagattaatataaaggaaacagggtgccc 119
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaaaatcttactgggatgaggactccaggagattaatataaaggaaacagggtgcct 320
Query: 120 ttccctaacccacgaggtctccatattatgtctaagtacacctttgtgctcatttcttca 179
||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 321 ttccctaacccacgaggtctccataccaggtctaagtacacctttgtgctcatttcttca 380
Query: 180 tccttctcgttctagaatggaaaagtta 207
||||||||||||||||||||||||||||
Sbjct: 381 tccttctcgttctagaatggaaaagtta 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 608
Length adjustment: 9
Effective length of query: 198
Effective length of database: 599
Effective search space: 118602
Effective search space used: 118602
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
