Query= MSMg01no439_l23.b1 MSMg01no439_l23.b1 CHROMAT_FILE:
MSMg01no439_l23.b1 PHD_FILE: MSMg01no439_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:58 2005
(295 letters)
>mm_chr11_87013578_87014272
Length = 695
Score = 495 bits (256), Expect = e-144
Identities = 265/268 (98%)
Strand = Plus / Plus
Query: 1 ctggtactccaaggatgtggaggaagtgagtgaggaggaagggtatctagttgaagtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggtactccaaggatgtggaggaagtgagtgaggaggaagggtatctagttgaagtatt 260
Query: 61 gctgttatccaggtggaggatctgtgatgtcacccaggaatctggtaatcttagatcgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgttatccaggtggaggatctgtgatgtcacccaggaatctggtaatcttagatcgta 320
Query: 121 agctttgggagagtgagagtgccacccagtgagtctgtttgcaggctcatagacaggctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctttgggagagtgagagtgccacccagtgagtctgtttgcaggctcatagacaggctc 380
Query: 181 ttgctggctatctactctccccgtggcaacagggatcccagactcaactatgagggtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgctggctatctactctccccgtggcaacagggatcccagactcaactatgagggtgga 440
Query: 241 gatggagagggctgcttttggagggtga 268
||||||||||||||| ||||||||||
Sbjct: 441 gatggagagggctgcaaatggagggtga 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no439_l23.g1 MSMg01no439_l23.g1 CHROMAT_FILE:
MSMg01no439_l23.g1 PHD_FILE: MSMg01no439_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:58 2005
(282 letters)
>mm_chr11_87190160_87190841
Length = 682
Score = 540 bits (279), Expect = e-158
Identities = 282/283 (99%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 1 actatgtagatctcttgtcaaacaaaagagatctacctgtctgcctctaggcttaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 actatgtagatctcttgtcaaacaaaagagatctacctgtctgcctctaggcttaaagga 399
Query: 61 gtacagtccattcctatagttaattttgtggatggtttacaaatttgagctgatgaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gtacagtccattcctatagttaattttgtggatggtttacaaatttgagctgatgaaatt 339
Query: 121 agttttagtgacctcagtctatttgtttaatttttgttatttgtcattttaaagggaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agttttagtgacctcagtctatttgtttaatttttgttatttgtcattttaaagggaaaa 279
Query: 181 tttcaaagctatgtgtagccattgaaatatgtcctctagaatagttagattatggtaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tttcaaagctatgtgtagccattgaaatatgtcctctagaatagttagattatggtaaac 219
Query: 241 tttgtttgttttggggttttttt-gtttttgtttttgtttttg 282
||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 218 tttgtttgttttggggttttttttgtttttgtttttgtttttg 176
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
