Query= MSMg01no440_n20.b1 MSMg01no440_n20.b1 CHROMAT_FILE:
MSMg01no440_n20.b1 PHD_FILE: MSMg01no440_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:27 2005
(399 letters)
>mm_chr11_105136838_105137636
Length = 799
Score = 748 bits (387), Expect = 0.0
Identities = 393/395 (99%)
Strand = Plus / Minus
Query: 5 gaattcagtaggtgctcttcagcctggaatttgtaggtatacacaaagcatttactgaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gaattcagtaggtgctcttcagcctggaatttgtaggtatacacaaagcatttactgaga 540
Query: 65 agtctgtattttctttaaaccactactttcaggattccaatgattaactgcaaagaagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 agtctgtattttctttaaaccactactttcaggattccaatgattaactgcaaagaagaa 480
Query: 125 tcccagtgaggtggtgggtatggccccaggctgctccactgccttcttcctcaccttcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tcccagtgaggtggtgggtatggccccaggctgctccactgccttcttcctcaccttcct 420
Query: 185 cccataaagacattggtagaagatcacacccactgaccaaacatcgactttatttgagat 244
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cccataaagacactggtagaagatcacacccactgaccaaacatcgactttatttgagat 360
Query: 245 ctttggtggctctttcccaaccacaaaacactctggtggtaaatacctaggagaaaacag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctttggtggctctttcccaaccacaaaacactctggtggtaaatacctaggagaaaacag 300
Query: 305 aaaaaaaacactcagaaaattaaatatataaatccaagctgtatacaaaaaggcaaataa 364
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaataaaacactcagaaaattaaatatataaatccaagctgtatacaaaaaggcaaataa 240
Query: 365 agggttaaaaactgagcactcagcactgaggaaca 399
|||||||||||||||||||||||||||||||||||
Sbjct: 239 agggttaaaaactgagcactcagcactgaggaaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_n20.g1 MSMg01no440_n20.g1 CHROMAT_FILE:
MSMg01no440_n20.g1 PHD_FILE: MSMg01no440_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:27 2005
(417 letters)
>mm_chr11_104958585_104959401
Length = 817
Score = 766 bits (396), Expect = 0.0
Identities = 415/428 (96%), Gaps = 13/428 (3%)
Strand = Plus / Plus
Query: 1 agatcctggcacccacataaaaagctgcgcatgcctgtcaccccagtgcaggggtgaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 agatcctggcacccacataaaaagctgcgcatgcctgtcaccccagtgcaggggtgaggg 251
Query: 61 aacgaggtggagcttgctagatgctgggcttgctccagattcaatgaaagaactgtctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aacgaggtggagcttgctagatgctgggcttgctccagattcaatgaaagaactgtctca 311
Query: 121 aaggatacagtggaatgtactagagcaggatgcctggcctccacgcgtggaagtgagcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaggatacagtggaatgtactagagcaggatgcctggcctccacgcgtggaagtgagcat 371
Query: 181 acccacaaatacacattcaaaaatggaggaggaagacaaggaggagga---------aga 231
|||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 372 acccacaaatacacattcaaaaatggaggaggaagacaaggaggaggaggaggaggaaga 431
Query: 232 ggagagaagagtcaacaaacgcatctttgcctggtgatgacctgaactctgtctccaaat 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggagagaagagtcaacaaacgcatctttgcctggtgatgacctgaactctgtctccaaat 491
Query: 292 cctacatagtggaagaagaaaattaactcctgcaagtttgtctctaaactctatatgcca 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cctacatagtggaagaagaaaattaactcctgcaagtttgtctctaaactctatatgcca 551
Query: 352 tgtcaaatacatacacacatacagacacacacacac--tcattcacacacacacacacac 409
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 552 tgtcaaatacatacacacatacagacacacacacacactcat--acacacacacacacac 609
Query: 410 acacacat 417
||||||||
Sbjct: 610 acacacat 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
