Query= MSMg01no441_l09.b1 MSMg01no441_l09.b1 CHROMAT_FILE:
MSMg01no441_l09.b1 PHD_FILE: MSMg01no441_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:36 2005
(407 letters)
>mm_chr11_11657778_11658584
Length = 807
Score = 729 bits (377), Expect = 0.0
Identities = 392/397 (98%), Gaps = 2/397 (0%)
Strand = Plus / Plus
Query: 12 gaattcttgtttc-ctcaatgagtcacctgggcattaacatttttaaaattcattaattt 70
||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gaattcttggtacactcaatgagtcacctgggcattaacatttttaaaattcattaattt 271
Query: 71 tgactaagtccataatagtcatagctcagtagagagtacattatttttttatcttttttt 130
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 272 tgactaagtccataatagtcatagctcagtagagagtacattatttttttatc-tttttt 330
Query: 131 ttttttggttataaatgtattgattgcaaccccattacccagaaggccaatatttaattg 190
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 331 ttttttggttataaatgtattgattgcatccccattacccagaaggccaatatttaattg 390
Query: 191 gagtcttaaactcaattgtgttttctgcagttggtaagcctcacaaatgtggatattgtg 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gagtcttaaactcaattgtgttttctgcagttggtaagcctcacaaatgtggatattgtg 450
Query: 251 gccggagctataaacagcgaagctctttagaggagcataaagagcgatgccacaactact 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gccggagctataaacagcgaagctctttagaggagcataaagagcgatgccacaactact 510
Query: 311 tggaaagcatgggccttccgggcatgtacccaggtaagcactgaggccctgctgagctgc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tggaaagcatgggccttccgggcatgtacccaggtaagcactgaggccctgctgagctgc 570
Query: 371 acccctccccctcccagcgcctgggccaggatggggc 407
|||||||||||||||||||||||||||||||||||||
Sbjct: 571 acccctccccctcccagcgcctgggccaggatggggc 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_l09.g1 MSMg01no441_l09.g1 CHROMAT_FILE:
MSMg01no441_l09.g1 PHD_FILE: MSMg01no441_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:36 2005
(438 letters)
>mm_chr11_11837401_11838238
Length = 838
Score = 832 bits (430), Expect = 0.0
Identities = 436/438 (99%)
Strand = Plus / Minus
Query: 1 tgtagcacccttcctggtgttttatgattgtttcatggcgggagggtggtctctgacacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tgtagcacccttcctggtgttttatgattgtttcatggcgggagggtggtctctgacacg 579
Query: 61 ttgccctggctgattcccctgtatcttagaatctgtggcctttgctttgcagcgcagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ttgccctggctgattcccctgtatcttagaatctgtggcctttgctttgcagcgcagtgt 519
Query: 121 ttctgagaattctcttgtggccatggatttttctggacaaatcggaagagtgatcgataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ttctgagaattctcttgtggccatggatttttctggacaaatcggaagagtgatcgataa 459
Query: 181 cccggctgaagcccagagtgctgccctggaagagggccatgcctggcgtgtaaggcacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cccggctgaagcccagagtgctgccctggaagagggccatgcctggcgtgtaaggcacta 399
Query: 241 atcccagtctggttgaaactgtttacacacatatacccaagttataccaggagaatggct 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 accccagtctggttgaaactgtttacacacatatacccaagttataccaggagaatggct 339
Query: 301 ctcctggtgttggtggaagggagtatgggagtaagtgcaggaagcagctggccccaaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctcctggtgttggtggaagggagtatgggagtaagtgcaggaagcagctggccccaaagg 279
Query: 361 tccaccatattgtcagccctccacaccagtctatcctgagctgttcctgctgataaatta 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 278 tccaccatattgtcagccctccacaccagtctatcctgagctgttcctgctgataagtta 219
Query: 421 atagtggctgtttgtaga 438
||||||||||||||||||
Sbjct: 218 atagtggctgtttgtaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
