Query= MSMg01no442_f15.b1 MSMg01no442_f15.b1 CHROMAT_FILE:
MSMg01no442_f15.b1 PHD_FILE: MSMg01no442_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:28 2005
(431 letters)
>mm_chr11_109203549_109204379
Length = 831
Score = 789 bits (408), Expect = 0.0
Identities = 426/438 (97%), Gaps = 10/438 (2%)
Strand = Plus / Plus
Query: 4 ggaattccatctcattccgtcttggaggccacccactgtcacccacccactgtcacttgg 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatctcattcggtcttggaggccacccactgtcacccacccactgtcacttgg 263
Query: 64 gggtgcttctgatgatttaccccaaagttcatcacaactgcaaccactctagggcaattc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gggtgcttctgatgatttaccccaaagttcatcacaactgcaaccactctagggcaattc 323
Query: 124 caaggcctacccaaataaatctgatgggagtcctcaggctgcgcatccttttttggaatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caaggcctacccaaataaatctgatgggagtcctcaggctgcgcatccttttttggaatt 383
Query: 184 ctgggtgttctcactgtagctcttcctcacgtcatctttcttactaagtcctcagcccag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgggtgttctcactgtagctcttcctcacgtcatctttcttactaagtcctcagcccag 443
Query: 244 cctctaccccatccacatccacatccccacccctggtcaagaggcagcaaagcatggtat 303
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 444 cctctaccccatccacatccacatccccacccctggccaagaggcagcaaagcatggtat 503
Query: 304 ccactgtgctgggcagtcggcagtcgtgacccgaaacacacacacacacacacacacaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccactgtgctgggcagtcggcagtcgtgacccgaaacacacacacacacacacacacaca 563
Query: 364 cacacacac----------tcaggttaatcttcatctggttgtgtactttcctgctctga 413
||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cacacacacacacacacactcaggttaatcttcatctggttgtgtactttcctgctctga 623
Query: 414 atcatcaccctctccagt 431
||||||||||||||||||
Sbjct: 624 atcatcaccctctccagt 641
Score = 62.6 bits (32), Expect = 5e-14
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 341 acacacacacacacacacacacacacacacac 372
||||||||||||||||||||||||||||||||
Sbjct: 793 acacacacacacacacacacacacacacacac 762
Score = 62.6 bits (32), Expect = 5e-14
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 339 acacacacacacacacacacacacacacacac 370
||||||||||||||||||||||||||||||||
Sbjct: 793 acacacacacacacacacacacacacacacac 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 3
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_f15.g1 MSMg01no442_f15.g1 CHROMAT_FILE:
MSMg01no442_f15.g1 PHD_FILE: MSMg01no442_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:28 2005
(506 letters)
>mm_chr11_109374887_109375792
Length = 906
Score = 963 bits (498), Expect = 0.0
Identities = 504/506 (99%)
Strand = Plus / Minus
Query: 1 tagagctccatgaatgctctaggtgcatgccaccaaggctggtgacttggattcaatttc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 559 tagagctccatgaatgctctaggtgcatgccaccaaggctggtaacttggattcaatttc 500
Query: 61 tgggatgcacatggtagaaaagagaaccagttcctacaggttatcctctgacctctacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgggatgcacatggtagaaaagagaaccagttcctacaggttatcctctgacctctacat 440
Query: 121 ggggtacagcaggcatatgacactacccccaacatgtccacaaaataaataaaatgtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ggggtacagcaggcatatgacactacccccaacatgtccacaaaataaataaaatgtaat 380
Query: 181 ataaacatgttctttaaaattctaggcatggccccacccttaaggaacatacaacctgtt 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ataaacatgttctttaaaatactaggcatggccccacccttaaggaacatacaacctgtt 320
Query: 241 tccagcacccacatggtggttcacaaccatctgtaattccagtcccagaagatccgagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tccagcacccacatggtggttcacaaccatctgtaattccagtcccagaagatccgagcc 260
Query: 301 cctcttctggaccctgaaggtaccaagcacacacaaggtgtacaggcatgtacgcaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cctcttctggaccctgaaggtaccaagcacacacaaggtgtacaggcatgtacgcaggca 200
Query: 361 aatctacacataaaagaagtaaacataaaaagaaaagtaatttaaagaaagccaagcgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aatctacacataaaagaagtaaacataaaaagaaaagtaatttaaagaaagccaagcgtg 140
Query: 421 gagtagcttagagagcaacaatggatgagagtgtgtaagaccccaaactcatgacagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gagtagcttagagagcaacaatggatgagagtgtgtaagaccccaaactcatgacagaga 80
Query: 481 taaggggagggtgacaagagactttt 506
||||||||||||||||||||||||||
Sbjct: 79 taaggggagggtgacaagagactttt 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
