Query= MSMg01no444_a22.b1 MSMg01no444_a22.b1 CHROMAT_FILE:
MSMg01no444_a22.b1 PHD_FILE: MSMg01no444_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:51 2005
(569 letters)
>mm_chr11_95986287_95987255
Length = 969
Score = 1023 bits (529), Expect = 0.0
Identities = 557/571 (97%), Gaps = 10/571 (1%)
Strand = Plus / Plus
Query: 4 ggaattcactttgtataccaagccgggctcaaactaagatccacctgcctctatgttcca 63
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggaattcactctgtagaccaagccgggctcaaactaagatccacctgcctctatgttcca 259
Query: 64 agtgctgggattaaaggcctgtgtcatcattgcccagcttcctgtaattttatctttttt 123
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 260 agtgctgggattaaaggcctgtggcatcattgcccagcttcctgtaattttatctttttt 319
Query: 124 ttt------ggggggggggcgtcctgaaagaatactcttcttagtcttgagaaag-tatc 176
||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 320 ttttttgggggggggggggcgtcctgaaagaatactcttcttagtcttgagaaagttatc 379
Query: 177 tagaatttgagccctagggaaatatattcttaacatttggggataaagtagaaaaggaac 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tagaatttgagccctagggaaatatattcttaacatttggggataaagtagaaaaggaac 439
Query: 237 taagtatttattaattattgttatgtgccaggtgcttcaaaaaatgaatttagtatttat 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taagtatttattaattattgttatgtgccaggtgcttcaaaaaatgaatttagtatttat 499
Query: 297 acagtttctgtcatcgtcgccgtcgtcatcatcatcatcatcaccctgggttgggggtga 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 500 acagtttctgtcatcgtcgccgtcg---tcatcatcatcatcaccctgggttgggggtga 556
Query: 357 ttgaacccagagacttgggcaagtgcttcaacactgagccattggccaccatccccccct 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttgaacccagagacttgggcaagtgcttcaacactgagccattggccaccatcccccccc 616
Query: 417 ccccctttgatagtgtggtgcttattttgaacgaaatactgtttgaagaacattagaaac 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ccccctttgatagtgtggtgcttattttgaacgaaatactgtttgaagaacattagaaac 676
Query: 477 attagcatggtctttagaactacctaaggagatgaatattatccttatttacaagggaag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 attagcatggtctttagaactacctaaggagatgaatattatccttatttacaagggaag 736
Query: 537 cgaggcataaaggaaaagtaagaaaggaata 567
|||||||||||||||||||||||||||||||
Sbjct: 737 cgaggcataaaggaaaagtaagaaaggaata 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_a22.g1 MSMg01no444_a22.g1 CHROMAT_FILE:
MSMg01no444_a22.g1 PHD_FILE: MSMg01no444_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:51 2005
(245 letters)
>mm_chr11_96165830_96166474
Length = 645
Score = 468 bits (242), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Minus
Query: 1 cttttccagctccagggtctggtagcgagtataggcggtccgggccctttttccgtctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttttccagctccagggtctggtagcgagtataggcggtccgggccctttttccgtctgg 386
Query: 61 cccagtcatatctagagcagttagaggagagccccgaggcaacgttattccggttaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccagtcatatctagagcagttagaggagagccccgaggcaacgttattccggttaaagg 326
Query: 121 agggggcactgagtgggagggggcggngagcaggacccaggcgtccccagcacccagctc 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 agggggcactgagtgggagggggcggggagcaggacccaggcgtccccagcacccagctc 266
Query: 181 accgcagctcccatcctcctcaccccagatgcctgcatccagcctctatttcttcatacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accgcagctcccatcctcctcaccccagatgcctgcatccagcctctatttcttcatacc 206
Query: 241 ccccc 245
|||||
Sbjct: 205 ccccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
