Query= MSMg01no445_g08.b1 MSMg01no445_g08.b1 CHROMAT_FILE:
MSMg01no445_g08.b1 PHD_FILE: MSMg01no445_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:35 2005
(283 letters)
>mm_chr11_98332954_98333636
Length = 683
Score = 420 bits (217), Expect = e-122
Identities = 254/277 (91%), Gaps = 20/277 (7%)
Strand = Plus / Minus
Query: 1 tgtcacagatgacagagacctgggctgcagctccagctcaggtctcctccccatcagtgt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgtcacagatgacagagacctggcctgcagctccagctcaggtctcctccccatcagtgt 335
Query: 61 ttatactttcttcccttcctgctgctgcctgactccctcatgtcctgaaaggagtgttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ttatactttcttcccttcctgctgctgcctgactccctcatgtcctgaaaggagtgttag 275
Query: 121 taactccagtcttccttaagttgaaatcagaatcactaccaagcaccaagtaccccattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 274 taactccagtcttccttaagttgaaatcagaatcactaccaagcaccaagtaccccactt 215
Query: 181 ttctttcctatctgccctaccttctttcttccctccctcgccccctccctccctcccctc 240
||||||||||||||||||||||| ||||||||||||||| ||||| ||
Sbjct: 214 ttctttcctatctgccctaccttttttcttccctccctc---ccctc-----------tc 169
Query: 241 tctcnctcctttccttcctcctttcctccctccctcc 277
|||| ||||||||||||||| ||||||||||||
Sbjct: 168 tctc--tcctttccttcctcc----ctccctccctcc 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no445_g08.g1 MSMg01no445_g08.g1 CHROMAT_FILE:
MSMg01no445_g08.g1 PHD_FILE: MSMg01no445_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:35 2005
(239 letters)
>mm_chr11_98151536_98152174
Length = 639
Score = 460 bits (238), Expect = e-134
Identities = 238/238 (100%)
Strand = Plus / Plus
Query: 1 attgcttagtcctccgggcagatggaggcagggactctgcccttaaagaaccaggcttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgcttagtcctccgggcagatggaggcagggactctgcccttaaagaaccaggcttgg 260
Query: 61 gggtggtgaagctggcgtcatctctcgagagggcctgctccacgggggagagataaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggtggtgaagctggcgtcatctctcgagagggcctgctccacgggggagagataaacag 320
Query: 121 gaggagaagattccatgaagatgggccacatgtaccagtgtactctaagatgtgtacata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggagaagattccatgaagatgggccacatgtaccagtgtactctaagatgtgtacata 380
Query: 181 tcgctgtacacgcaggttggttaggatgcttgctgaggccaacacagcctgaatccac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcgctgtacacgcaggttggttaggatgcttgctgaggccaacacagcctgaatccac 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
