Query= MSMg01no446_j17.b1 MSMg01no446_j17.b1 CHROMAT_FILE:
MSMg01no446_j17.b1 PHD_FILE: MSMg01no446_j17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:11 2005
(447 letters)
>mm_chr11_9239318_9240164
Length = 847
Score = 818 bits (423), Expect = 0.0
Identities = 441/447 (98%)
Strand = Plus / Plus
Query: 1 gttactgctctcagtttaactgatcatggtgtggagacagtcagagaaagaaagcagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 gttactgctctcagtttaactgatcatggtgtggagacagtcagagaaagagagcagatt 260
Query: 61 acagatgatggtctcccatgcacctgctcgctttaagctttggagctgggatgtcagatt 120
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 261 acagatgatggtctcccatgcaccggctcgcttcaagctttggagctgggatgtcagatt 320
Query: 121 atgatggggagaaatttattgtcagtgccatctttctactgattctctgattgtatctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgatggggagaaatttattgtcagtgccatctttctactgattctctgattgtatctga 380
Query: 181 atgggagaggatgccaaatggaccatgttactgttctcatatttctggaattctaacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgggagaggatgccaaatggaccatgttactgttctcatatttctggaattctaacatg 440
Query: 241 ataattttattgtctcagttgtaaaactactgttcattgaacacttcttttaaaagattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataattttattgtctcagttgtaaaactactgttcattgaacacttcttttaaaagattt 500
Query: 301 aagcataagaatggacactcccaaatactttcttgcctatttctcacaaaacccaagcac 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagcataagaatggacacttccaaatactttcttgcctatttctcacaaaacccaagcac 560
Query: 361 aagcagaaccattttagtaatgcaaaataattaaggctagagaaatctacacttcaagtg 420
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 561 aagcagaaccattttagtaatgcaaaataattaaggctagggaaatctacatttcaagtg 620
Query: 421 tattggctatctaatgaaaatctgtgg 447
|||||||||||||||||||||||||||
Sbjct: 621 tattggctatctaatgaaaatctgtgg 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no446_j17.g1 MSMg01no446_j17.g1 CHROMAT_FILE:
MSMg01no446_j17.g1 PHD_FILE: MSMg01no446_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:11 2005
(288 letters)
>mm_chr11_9417690_9418376
Length = 687
Score = 538 bits (278), Expect = e-157
Identities = 284/286 (99%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 3 aaatggaacattcagataattacaaagatagtaaaggggaagctacaaacagaatgtgag 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aaatggaacattcagataattacaaagatagtaaaggggaagctacaaacagaatgtgag 428
Query: 63 atttgaggttgcaactaaaggatcaaacatgaacaacatgtttggcttgggacgatatgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 427 atttgaggttgcaactaaaggatcaaacatgaacaacatgtttggcttggggcgatatgt 368
Query: 123 ttcgaactattaaagataaaatcagtaaactcaaattactatattctacaaaactaccca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttcgaactattaaagataaaatcagtaaactcaaattactatattctacaaaactaccca 308
Query: 183 taacaactgaaaaattaaaaaaaaaatactttccatgataaatagaaactaggaaactgt 242
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 taacaactgaaaaatt-aaaaaaaaatactttccatgataaatagaaactaggaaactgt 249
Query: 243 ggctactaaggaagccctaaattggtaaagagctctttcacttagt 288
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggctactaaggaagccctaaattggtaaagagctctttcacttagt 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
