Query= MSMg01no447_o13.b1 MSMg01no447_o13.b1 CHROMAT_FILE:
MSMg01no447_o13.b1 PHD_FILE: MSMg01no447_o13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:58 2005
(251 letters)
>mm_chr11_45735954_45736603
Length = 650
Score = 464 bits (240), Expect = e-135
Identities = 248/251 (98%), Gaps = 1/251 (0%)
Strand = Plus / Minus
Query: 1 ctaccttanaccaaccataggcagagtggagaggaagtacagtgacaggctgtccccacg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ctaccttaaaccaaccataggcagagtggagaggaagtacagtgacaggctgtccccacg 391
Query: 61 cctggctctgtgttctttgagcactgtattagtggtatagccaaacacagttgggattcc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cctggctctgtgctctttgagcactgtattagtggtatagccaaacacagttgggattcc 331
Query: 121 tgtagctatgactgttggatattggagttgggtgttccctccctagtgtagcagacgaga 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 330 tgtagctatgactgttggatattggagttgggtgttccctcccta-tgtagcagacgaga 272
Query: 181 cctggctcctcagtaccgttcagttctcaaggaggggacaacatgactgttcagctttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cctggctcctcagtaccgttcagttctcaaggaggggacaacatgactgttcagctttca 212
Query: 241 acctccaagtg 251
|||||||||||
Sbjct: 211 acctccaagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 650
Length adjustment: 9
Effective length of query: 242
Effective length of database: 641
Effective search space: 155122
Effective search space used: 155122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no447_o13.g1 MSMg01no447_o13.g1 CHROMAT_FILE:
MSMg01no447_o13.g1 PHD_FILE: MSMg01no447_o13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:58 2005
(476 letters)
>mm_chr11_45553872_45554747
Length = 876
Score = 905 bits (468), Expect = 0.0
Identities = 474/476 (99%)
Strand = Plus / Plus
Query: 1 tttgtgtcaccttctttcagtgggataatcccaattcatgagagctagaagatgaacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtgtcaccttctttcagtgggataatcccaattcatgagagctagaagatgaacatc 260
Query: 61 caacaaggatgaaggaagagcccaaaatatgtcatatacaagatagaagggggaaaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caacaaggatgaaggaagagcccaaaatatgtcatatacaagatagaagggggaaaataa 320
Query: 121 tatgaaattataccagagcttaatgcaagagatatggctagtggtgggttccctctccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgaaattataccagagcttaatgcaagagatatggctagtggtgggttccctctccac 380
Query: 181 caatcctgacttctaaaacctaaaagcagggtggggatggagaagagaagggaaattaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatcctgacttctaaaacctaaaagcagggtggggatggagaagagaagggaaattaaa 440
Query: 241 agtagaattcccaccttgatgctcaaagtgtagcccacagacagcagcaatggtgttacc 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 agtagaattcccaccttgatgctcaaagtgtagcccacagacagcagcagtggtgttacc 500
Query: 301 taagagcatgttagaaacacagaatctcgggccacattcagatctatggagtcagagata 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taagagcatgttagaaacacagaatctcgggccacattcagatctatggagtcagagatg 560
Query: 361 catctgatagaaataaaatgcaggttaataaagggagctaacatgagatctcccttcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catctgatagaaataaaatgcaggttaataaagggagctaacatgagatctcccttcaga 620
Query: 421 agaactttaataggagggagagactggtgaccataggagccatggtcagtctcaaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaactttaataggagggagagactggtgaccataggagccatggtcagtctcaaa 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
