Query= MSMg01no448_c09.b1 MSMg01no448_c09.b1 CHROMAT_FILE:
MSMg01no448_c09.b1 PHD_FILE: MSMg01no448_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:18 2005
(309 letters)
>mm_chr11_98809084_98809798
Length = 715
Score = 555 bits (287), Expect = e-162
Identities = 305/315 (96%), Gaps = 8/315 (2%)
Strand = Plus / Minus
Query: 1 aaaaacgctaaacatggcgctagggcacagagcaagtccaccctttgctatctacccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aaaaacgctaaacatggcgctagggcacagagcaagtccaccctttgctatctacccagg 652
Query: 61 aaacaagactgtggcagtcgagcacaagaatgtgtgtgtgtgtgaatgttcagagcggga 120
||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aaacaagac--tggcagttgagcacaagaatgtgtgtgtgtgtgaatgttcagagcggga 594
Query: 121 gtgccaatcatgaccgggcagtgaaaccaacccaaaggtctatcagtgggaaacagataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gtgccaatcatgaccgggcagtgaaaccaacccaaaggtctatcagtgggaaacagataa 534
Query: 181 caaaatgtcagatacccaatgcactagactctttctgt------gagagagagaacacac 234
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 533 caaaatgtcagatacccaatgcactagactctttctgtgagagagagagagagaacacac 474
Query: 235 gagagaacacggcgctgacacagtaacatgccccagccctgagaataacacggttcccga 294
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 473 gagagaacacggcgctgacacagtaacatgccccagccctgagaagaacacggttcccga 414
Query: 295 agaccgtatgttgta 309
|||||||||||||||
Sbjct: 413 agaccgtatgttgta 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 715
Length adjustment: 9
Effective length of query: 300
Effective length of database: 706
Effective search space: 211800
Effective search space used: 211800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_c09.g1 MSMg01no448_c09.g1 CHROMAT_FILE:
MSMg01no448_c09.g1 PHD_FILE: MSMg01no448_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:18 2005
(312 letters)
>mm_chr11_98665680_98666391
Length = 712
Score = 551 bits (285), Expect = e-161
Identities = 305/312 (97%)
Strand = Plus / Plus
Query: 1 cagttgcaggggacctgatgcccttttctgacctcaaagggcactacattcacatgtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagttgcaggggacctgatgcccttttctgacctcaaagggcactacattcacatgtaca 260
Query: 61 aatccacacacagggacagaaacacaaaatcgtataaaataaagcaaataaaaaatttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatccacacacagggacagaaacacaaaatcgtataaaataaagcaaataaaaaatttac 320
Query: 121 aattgcagacttttcaaggggggaaaaagagtgcaagtctccacagcacagctgcttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattgcagacttttcaaggggggaaaaagagtgcaagtctccacagcacagctgcttgtg 380
Query: 181 acgggtgagctgtgctgtggaggtggtggtggtggcagcggtggcggntggatatttctc 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 acgggtgagctgtgctgtggaggtggtggtggtggcagcggtggcggttggatatttctc 440
Query: 241 ttttttttgctaacaaggctccatgtgattttcttccatagttgattgtttgctgattac 300
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 acctctttgctaacaaggctccatgtgattttcttccatagttgaaagtttgctgattac 500
Query: 301 ccccttcttgcc 312
||||||||||||
Sbjct: 501 ccccttcttgcc 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
