Query= MSMg01no448_k22.b1 MSMg01no448_k22.b1 CHROMAT_FILE:
MSMg01no448_k22.b1 PHD_FILE: MSMg01no448_k22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:02 2005
(437 letters)
>mm_chr11_115270725_115271561
Length = 837
Score = 777 bits (402), Expect = 0.0
Identities = 426/438 (97%), Gaps = 8/438 (1%)
Strand = Plus / Minus
Query: 4 ggaattcactgcggatttcc----agggaggaacagcagttctgagactctcagaagccc 59
||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggaattcactgcgga----cggggagggaggaacagcagttctgagactctcagaagccc 602
Query: 60 cggagtccaggcctcagggatagccaaccacctaagcaggcacattctattctagcctat 119
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 601 cggagtccaggcctcagggatagccaaccacctaagcagacacattctattctagcctat 542
Query: 120 gtcaaaactggccatggaaaggcccgcaaagctaatggagttcttcagtataaagattct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcaaaactggccatggaaaggcccgcaaagctaatggagttcttcagtataaagattct 482
Query: 180 agtttgcaaatacttctagtatgctaatttcccaggctccttctgacagtttcactggac 239
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 481 agtttgcaaatacttctagtatgcaaatttcccaggctccttatgacagtttcactggac 422
Query: 240 tctgaaaacagcagggggatgggtttctcacgagcaaaaggaacctgttctccatggact 299
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctgaaaacagcaggggggtgggtttctcacgagcaaaaggaacctgttctccatggact 362
Query: 300 gagcaggctgccctctcatgctgtgaattctctttgtttaccctcaaaagccgatcccag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagcaggctgccctctcatgctgtgaattctctttgtttaccctcaaaagccgatcccag 302
Query: 360 tcttagcaatccgcagctgagaggcagacaatcgggcacattcagaagactagaaaggat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcttagcaatccgcagctgagaggcagacaatcgggcacattcagaagactagaaaggat 242
Query: 420 tattataagctggaggtg 437
||||||||||||||||||
Sbjct: 241 tattataagctggaggtg 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_k22.g1 MSMg01no448_k22.g1 CHROMAT_FILE:
MSMg01no448_k22.g1 PHD_FILE: MSMg01no448_k22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:02 2005
(245 letters)
>mm_chr11_115089368_115090013
Length = 646
Score = 435 bits (225), Expect = e-126
Identities = 240/245 (97%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 atcttcagtgatgcagataggccccagggaggctctgccagaaagtccgagcgttcagct 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 atcttcagtgatgcggataggccccagggaggctctgccagaaagtccgagcattcagct 260
Query: 61 gtcttactgcgaggcctcagccctgtgcacaggctgtggccccc-tcacagcctgcctgg 119
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gtcttactgcgaggcctcagccctgtgcacaggctgtggcccccttcacagcctgcctgg 320
Query: 120 tgtccagccctgcgcaccttctcattgctcctctcgtccatccccaggccatcttcaccg 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtccagccctgcacaccttctcattgctcctctcgtccatccccaggccatcttcaccg 380
Query: 180 tcctccttggcccgttcaccttctttgatgtccagaagactaagtacctgcagatcttga 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccttcttggcccgttcaccttctttgatgtccagaagactaagtacctgcagatcttga 440
Query: 240 cctct 244
|||||
Sbjct: 441 cctct 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
