Query= MSMg01no448_n20.b1 MSMg01no448_n20.b1 CHROMAT_FILE:
MSMg01no448_n20.b1 PHD_FILE: MSMg01no448_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:17 2005
(398 letters)
>mm_chr11_58231430_58232227
Length = 798
Score = 644 bits (333), Expect = 0.0
Identities = 382/399 (95%), Gaps = 5/399 (1%)
Strand = Plus / Plus
Query: 1 gaattctgtgaagttttcacggatgcacaaagagtatgtatgtgttgagatagaaagccc 60
||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattctgtgaagttctcgcggttgcacaaagagtatgtatgtgttgagatagaaagccc 260
Query: 61 agggaacaaaagtagaaataactattcctttatggaagtttgcattctctctctctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggaacaaaagtagaaataactattcctttatggaagtttgcattctctctctctctct 320
Query: 121 ctctctctctctctctctctctctctctctctctccctctgtctctctcttccttctcct 180
|||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 ctctctctctctctct-t-tctctctctctctctccctct--ctctctcttccttctcct 376
Query: 181 tcttcacaccctctttctctccccttcctctcctccccctttattatgaatccttgaatg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tcctcacaccctctttctctccccttcctctcctccccctttattatgaatccttgaatg 436
Query: 241 gcctagaagtctttttgtaaaccaggcttgtctgtttcttacatggatctgccgatctct 300
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 437 gcctagaagtctttttgtaaaccaggcttgtctggaacttacacggatctgccgatctct 496
Query: 301 tccttctaagtgctggtattaaaggtatgtgtcataccattaagtcatactcattttttc 360
||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 497 tccttctgagtgctgggattaaaggcatgtgtcataccattaagtcatactcattttttc 556
Query: 361 cc-gtaacgttctgctgaagaatgttttgctggctaatg 398
|| ||||| ||||||||||||||||||||||||||||||
Sbjct: 557 cccgtaacattctgctgaagaatgttttgctggctaatg 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_n20.g1 MSMg01no448_n20.g1 CHROMAT_FILE:
MSMg01no448_n20.g1 PHD_FILE: MSMg01no448_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:17 2005
(421 letters)
>mm_chr11_58418269_58419089
Length = 821
Score = 754 bits (390), Expect = 0.0
Identities = 411/418 (98%)
Strand = Plus / Minus
Query: 4 ttatctcggactcattaatcaccttggaattcatgttccagtatcaatagtacaaagaga 63
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 ttatcttggactcattaatcaccttggaattcatggtccagtatcaatagtacaaagaga 562
Query: 64 gacaggttagttagctgggcagataagagaacagtgaaatgtacagccacggactgtgac 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacaggttagttatctgggcagataagagaacagtgaaatgtacagccacggactgtgac 502
Query: 124 tatgaaccttaggagaagacgtgaaggaaagtggggtggcattggggtgctgtgagaact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgaaccttaggagaagacgtgaaggaaagtggggtggcattggggtgctgtgagaact 442
Query: 184 cccacagggtgggaaggctggcttccttccactgtaaagagaagtgtccctggccatggt 243
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 cccacagggtgggaaggctggcttccttccactgtaaagagaagtgtccccggccatggt 382
Query: 244 tgttagtagcctgggtctgtctgctccaggaactgagttttactgttcttgtttgttttt 303
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagagtagcctgggtctgtctgctccaggaactgagttttactgttcttgtttgttttt 322
Query: 304 tactttgactggaaaaagcagaggtaacaacaaaaagcagaagcagacaaggggaggttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactttgactggaaaaagcagaggtaacaacaaaaagcagaagcagacaaggggaggttt 262
Query: 364 ttgtttgaaggccagatgtcctgcccagtagaggaagcagtgaaccaacagactacgg 421
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtttgaaggtcagatgtcctgcccagtagaggaagcagtgaaccaacagactacgg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
