Query= MSMg01no448_p10.b1 MSMg01no448_p10.b1 CHROMAT_FILE:
MSMg01no448_p10.b1 PHD_FILE: MSMg01no448_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:25 2005
(309 letters)
>mm_chr11_102416086_102416796
Length = 711
Score = 547 bits (283), Expect = e-160
Identities = 303/313 (96%), Gaps = 8/313 (2%)
Strand = Plus / Plus
Query: 2 gaattcaaacccttc----taccgccttctgac-cagctagaggtgcgttgaggaagctg 56
||||||||||||||| | |||||||||| ||||||||||||||||||||||||||
Sbjct: 202 gaattcaaacccttcaaatt---gccttctgacacagctagaggtgcgttgaggaagctg 258
Query: 57 aaaggaatacaaaaactcgagttcggaggctcatcccttgacctaaattgctgttgccag 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaaggaatacaaaaactcgagttcggaggctcatcccttgacctaaattgctgttgccag 318
Query: 117 gagatgcggtagtaatgcagtgatttgcaactgaggatgtattttacctagaaataacca 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gagatgcggtagtaatgcagtgatttgcaactgaggatgtattttacctagaaataacca 378
Query: 177 aaggctactaaatcccttattgtctcccaactatgcctgcagtaacaatttcaatatcta 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaggctactaaatcccttattgtctcccaactatgcctgcagtaacaatttcaatatcta 438
Query: 237 aaagcctaatgattctaattcggcctttgttgtttgtttttttgttttgctttgtttttg 296
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 439 aaagcctaatgattctaattcggcctttgttgtttgtttttttgttttgttttgtttttg 498
Query: 297 ttgcttttttctt 309
||| |||||||||
Sbjct: 499 ttgtttttttctt 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 711
Length adjustment: 9
Effective length of query: 300
Effective length of database: 702
Effective search space: 210600
Effective search space used: 210600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_p10.g1 MSMg01no448_p10.g1 CHROMAT_FILE:
MSMg01no448_p10.g1 PHD_FILE: MSMg01no448_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:25 2005
(432 letters)
>mm_chr11_102602732_102603565
Length = 834
Score = 820 bits (424), Expect = 0.0
Identities = 431/434 (99%), Gaps = 2/434 (0%)
Strand = Plus / Minus
Query: 1 cttgaattgagagtgtcaggaagtgccaggaaacttttcttagctcctgcttgggcacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cttgaattgagagtgtcaggaagtgccaggaaacttttcttagctcctgcttgggcacag 575
Query: 61 ataaataccacttaaagagcagctttgggagaaacacccagagtagcagctcccactgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ataaataccacttaaagagcagctttgggagaaacacccagagtagcagctcccactgtc 515
Query: 121 caagaggaacagggagatagagtccatcaatctgcctgtttgtcagtttcagagagtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 caagaggaacagggagatagagtccatcaatctgcctgtttgtcagtttcagagagtttg 455
Query: 181 gcatttctgaaaaaaaaaaaaaaaaacggtaggcagctgtcaaactgcccaccccaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gcatttctgaaaaaaaaaaaaaaaaacggtaggcagctgtcaaactgcccaccccaaact 395
Query: 241 gctactgaatcagaaggaagaggacactgaacctcggtgtggagcagccagaagatgcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gctactgaatcagaaggaagaggacactgaacctcggtgtggagcagccagaagatgcag 335
Query: 301 gagccaagcttctgcatggggtcctggctccgaagcagcccaggcccgg--caggctctg 358
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 334 gagccaagcttctgcatggggtcctggctccgaagcagcctaggcccggggcaggctctg 275
Query: 359 cacttgcacttggatgcacttctgtctccggagagatccaaggcctgagccctggaacta 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cacttgcacttggatgcacttctgtctccggagagatccaaggcctgagccctggaacta 215
Query: 419 ggcgggggcaaccg 432
||||||||||||||
Sbjct: 214 ggcgggggcaaccg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 834
Length adjustment: 9
Effective length of query: 423
Effective length of database: 825
Effective search space: 348975
Effective search space used: 348975
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
