Query= MSMg01no449_i14.b1 MSMg01no449_i14.b1 CHROMAT_FILE:
MSMg01no449_i14.b1 PHD_FILE: MSMg01no449_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:11 2005
(572 letters)
>mm_chr11_66617662_66618636
Length = 975
Score = 992 bits (513), Expect = 0.0
Identities = 559/575 (97%), Gaps = 3/575 (0%)
Strand = Plus / Minus
Query: 1 acctgtaattgtatctctatgttgtcttttgttgtgctgcacactgctggatatatgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 acctgtaattgtatctctatgttgtcttttgttgtgctgcacactgctggatatatgaca 716
Query: 61 gaggattcttaacgttatgtccaatcagcatacattcatgacatctgtaaaggttattgt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gaggattcttagcgttatgtccaatcagcatacattcatgacatctgtaaaggttattgt 656
Query: 121 ctcttaaggcagacacatctgtaactttacacatctcagaactgctggctcccagcttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ctcttaaggcagacacatctgtaactttacacatctcagaactgctggctcccagcttta 596
Query: 181 gagatcaagcaatttttggacaggacatagaatacatgtatgaaattgcttttgggattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gagatcaagcaatttttggacaggacatagaatacatgtatgaaattgcttttgggattc 536
Query: 241 tctgtattg--ttttttttatagtctgcattcatttcaattcactgaatataacctgagt 298
||||||||| | || ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 535 tctgtattggcatgcttagatagtctgcattcatttcaattcactgaatatatcctgagt 476
Query: 299 acctactgtgctccaaatactgggcataaaagggttcataagatgtggctggcgatctgt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 acctactgtgctccaaatactgggcataaaagggttcataagatgtggctggcgatctgt 416
Query: 359 aggagcttttgttccaggagaaaggacaggctgagaaggcttagaatggcatgaatctca 418
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 415 aggagcttttgttccaggagaagggacaggctgagaaggcttggaatggcatgaatctca 356
Query: 419 ggatgtgaccctctgaattttgtttaattttagagagtaccttggagtctctctgtct-c 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 355 ggatgtgaccctctgaattttgtttaattttagagagtaccttggagtctctctgtctcc 296
Query: 478 tttctctctactgcttcagcatggctgttattatttcacttgactttatacctatgcagt 537
|||||||| ||||||||||||||||||| || ||||||||||||||||||||| ||||||
Sbjct: 295 tttctctccactgcttcagcatggctgtgatgatttcacttgactttatacctttgcagt 236
Query: 538 attcctagaatgtatttaaaatctcagtgtggata 572
|||||||||||||||||||||||||||||||||||
Sbjct: 235 attcctagaatgtatttaaaatctcagtgtggata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 975
Length adjustment: 10
Effective length of query: 562
Effective length of database: 965
Effective search space: 542330
Effective search space used: 542330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_i14.g1 MSMg01no449_i14.g1 CHROMAT_FILE:
MSMg01no449_i14.g1 PHD_FILE: MSMg01no449_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:11 2005
(243 letters)
>mm_chr11_66469379_66470021
Length = 643
Score = 439 bits (227), Expect = e-128
Identities = 239/243 (98%)
Strand = Plus / Plus
Query: 1 cattgattcttaggcaaacataacaaaaggaaacaggttaattatattctacacagctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattgattcttaggcaaacataacaaaaggaaacaggttaattatattctacacagctgc 260
Query: 61 tacactcacatgatgacatttcatctgctgatcatactctggtgaaaaagaattaagcaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacactcacatgatgacatttcatctgctgatcatactctggtgaaaaagaattaagcag 320
Query: 121 taaagaatcccaccgtcatctaggtagaatgatccaatcttctgcaaagaaaaagaaccc 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaagaatcccaccgtcatttaggtagaatgatccaatcttctgcaaagaaaaagaaccc 380
Query: 181 ttaagaacctctgggatccttcaatgttaaatgacagaaatttttttaaaaagcacttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaagaacctctgggatccttcaatgttaaatgacagaaatttttttaaaaagcacttag 440
Query: 241 aaa 243
|||
Sbjct: 441 aaa 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
