Query= MSMg01no449_j01.b1 MSMg01no449_j01.b1 CHROMAT_FILE:
MSMg01no449_j01.b1 PHD_FILE: MSMg01no449_j01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:13 2005
(468 letters)
>mm_chr11_3122246_3123113
Length = 868
Score = 897 bits (464), Expect = 0.0
Identities = 467/468 (99%)
Strand = Plus / Plus
Query: 1 ttctgagtttgttcttgtttgagacaggttttctctgtgtagcctggattgtcctggaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctgagtttgttcttgtttgagacaggttttctctgtgtagcctggattgtcctggaac 260
Query: 61 tagttctgtagaccaagctggcctcagccttagagatctacctgcctctaccacctaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagttctgtagaccaagctggcctcagccttagagatctacctgcctctaccacctaagt 320
Query: 121 gctaggattaaaaccgggtgccaacaccaccacccagaagattgtgctcaattgcctttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctaggattaaaaccgggtgccaacaccaccacccagaagattgtgctcaattgcctttg 380
Query: 181 agaggtaccattgtctcactacaccagaatgaagtagcatcagccagtgtggctgtttaa 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 agaggtaccattgtctcactacaccagaatgaagtagcatcagccagcgtggctgtttaa 440
Query: 241 ctgatgttagagaccaagcttctgtagaaaataatgttttctgtgactgagataaaattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgatgttagagaccaagcttctgtagaaaataatgttttctgtgactgagataaaattc 500
Query: 301 aaatgtcagccattcatgtagggttttgtcctgggacaaggtctcatgtaacccagactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatgtcagccattcatgtagggttttgtcctgggacaaggtctcatgtaacccagactg 560
Query: 361 gtaccaaacccagtgtgtagctgagggtggcttcagactgtactgcaccataatcattag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaccaaacccagtgtgtagctgagggtggcttcagactgtactgcaccataatcattag 620
Query: 421 tactgggcttatagatttgtcaccaaggccattattgtttgttttctt 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tactgggcttatagatttgtcaccaaggccattattgtttgttttctt 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_j01.g1 MSMg01no449_j01.g1 CHROMAT_FILE:
MSMg01no449_j01.g1 PHD_FILE: MSMg01no449_j01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:13 2005
(337 letters)
>mm_chr11_3296213_3296949
Length = 737
Score = 652 bits (337), Expect = 0.0
Identities = 337/337 (100%)
Strand = Plus / Minus
Query: 1 gtgaggcagtttcagagaagagacggtgggaggcggatttcagtggagtgtgaagcatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gtgaggcagtttcagagaagagacggtgggaggcggatttcagtggagtgtgaagcatcc 478
Query: 61 gggaaggggggctaagtgcattgtggcgcggacctttcactgtagatgcagctgagatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gggaaggggggctaagtgcattgtggcgcggacctttcactgtagatgcagctgagatgg 418
Query: 121 gaagaactggaatgcctgctggtgttgttaggagagactctgcttatttaaatgacaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaagaactggaatgcctgctggtgttgttaggagagactctgcttatttaaatgacaaca 358
Query: 181 gaaaggctttggtgccaggggtcagagctgggcaataaaccaaaaaaatgtatcttcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gaaaggctttggtgccaggggtcagagctgggcaataaaccaaaaaaatgtatcttcaaa 298
Query: 241 gaagcaggacagggatccagaggtagggccatgtcagggagcctggcttttatcctacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gaagcaggacagggatccagaggtagggccatgtcagggagcctggcttttatcctacat 238
Query: 301 acgctaggaagtctgacctggaatagagatagcctgg 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 acgctaggaagtctgacctggaatagagatagcctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
