Query= MSMg01no449_j04.b1 MSMg01no449_j04.b1 CHROMAT_FILE:
MSMg01no449_j04.b1 PHD_FILE: MSMg01no449_j04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:14 2005
(646 letters)
>mm_chr11_29367908_29368953
Length = 1046
Score = 1187 bits (614), Expect = 0.0
Identities = 638/646 (98%)
Strand = Plus / Minus
Query: 1 tggaagagcaccctgtgctcttatccactaagccatctcttcagtccctataataggttt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 894 tggaagagcaccctgtgctcttatccactaagccatctcttcagttcctataataggttt 835
Query: 61 ttaatacattcacgaagtttgattttagctgtgtttaatttttgatgtctgaattgcttt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 ttaatacattcacaaagtttgattttagctgtgtttaatttttgatgtctgaattgcttt 775
Query: 121 agacagttctggtagtattgtactgtaagaagagaaaaataaaaatctcaagtgagcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 agacagttctggtagtattgtactgtaagaagagaaaaataaaaatctcaagtgagcata 715
Query: 181 taaaattcttgaaaatataaacccaaagaaacaattatattgaaaaagaagtcaggataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 taaaattcttgaaaatataaacccaaagaaacaattatattgaaaaagaagtcaggataa 655
Query: 241 agagacaaaaagaattatatctgaaaccctggtgcagtagtaactttagcaaaacagtaa 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 agagacaaaaagaattacatctgaaaccctggtgcagtagtaactttagcaaaacagtaa 595
Query: 301 ggtgccatatatattcatagttagcatgctctacatataatcatacaactgaaagaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ggtgccatatatattcatagttagcatgctctacatataatcatacaactgaaagaaaga 535
Query: 361 catttctgacttttaccttagtatttaaagaacgtaataaccatcttttgctttactctt 420
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 534 catttctgacttttaccttactatttaaagaatgtaataaccatcttttgctttactctt 475
Query: 421 atttcttattattctctagcaattcaaactaaatagtaaaattacatagacaacttggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 atttcttattattctctagcaattcaaactaaatagtaaaattacatagacaacttggtt 415
Query: 481 tatttacaatcactgtatgttcagatgactcagagcttattaattgagaaagtgcattaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tatttacaatcactgtatgttcagatgactcagagcttattaattgagaaagtgcattaa 355
Query: 541 taaataatttccacaggagaagacaaatgttgtaaattcgtggacttaaggatgtacaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 taaataatttccacaggagaagacaaatgttgtaaattcgtggacttaaggatgtacaag 295
Query: 601 aaaaataacgtcatttaaaaaaatattcatgctaacaacaataatt 646
|||||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct: 294 aaaaataatgtcattttaaaaaatattcatgataacaacaataatt 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_j04.g1 MSMg01no449_j04.g1 CHROMAT_FILE:
MSMg01no449_j04.g1 PHD_FILE: MSMg01no449_j04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:14 2005
(472 letters)
>mm_chr11_29240487_29241358
Length = 872
Score = 868 bits (449), Expect = 0.0
Identities = 467/473 (98%), Gaps = 2/473 (0%)
Strand = Plus / Plus
Query: 1 atgaacacatttctgagtaggttttgagcagctgcctgtgaggattggctattctttctt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 201 atgaacacatttctgagtaggttttgagcagctgcctgtgaggattggttattctctctt 260
Query: 61 tgtagttggacatgatctattaactacttcaaatgtgactagtatgagcagttgtttgtt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtagttggacatggtctattaactacttcaaatgtgactagtatgagcagttgtttgtt 320
Query: 121 ataggaattttgtgtatcgtctaaatagtggattatttttcatgtaaataatttactaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataggaattttgtgtatcgtctaaatagtggattatttttcatgtaaataatttactaat 380
Query: 181 atttcctcccacccaggaatttttctttattgtagaacaatttaaaatgtgatgaaatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 atttcctcccacccaggaatttttctttattgtagaacaatttaaaatgcgatgaaatgc 440
Query: 241 agtctgttgttattgtttgtgcatctggtgtcatagttaagaatgtattaccaaaaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtctgttgttattgtttgtgcatctggtgtcatagttaagaatgtattaccaaaaaaaa 500
Query: 301 a-gaagaagaatgtattaccaagttcaagcccatgaagatttccccttatttcattctga 359
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagaagaagaatgtattaccaagttcaagcccatgaagatttccccttatttcattctga 560
Query: 360 gacttttatggttcttatatctaggtctctagccttttttttttttttaaggtagggatc 419
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 gacttttatggttcttatatctaggtctctagccttttttttttttt-aaggtagggatc 619
Query: 420 cagtattactctttagcatgaaaatacacagttattcaatttcacatttgttg 472
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cagtattactctttagcatgaaaatacacagttattcaatttcacatttgttg 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
