Query= MSMg01no450_p14.b1 MSMg01no450_p14.b1 CHROMAT_FILE:
MSMg01no450_p14.b1 PHD_FILE: MSMg01no450_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:04 2005
(244 letters)
>mm_chr11_43223519_43224162
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1 aaaaggagaaggcgaaaaccaacgccacaaagttgtcctctgacctccttatatagacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaggagaaggcgaaaaccaacgccacaaagttgtcctctgacctccttatatagacct 260
Query: 61 tagcacaagtatgaacatacaggcgtacacccaaacacacatgcaggtgaactccaaccc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 tagcacaagtatgaacatacaggcatacacccaaacacacatgcaggtgaactccaaccc 320
Query: 121 cttcccatctcagagatcctgcaactgcagtctcctctttctcccctgccctgctccaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcccatctcagagatcctgcaactgcagtctcctctttctcccctgccctgctccaga 380
Query: 181 gccaagtccttgcgcagaggtctggatccccagccgttggttttatgacacagctctcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccaagtccttgcgcagaggtctggatccccagccgttggttttatgacacagctctcag 440
Query: 241 cctg 244
||||
Sbjct: 441 cctg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_p14.g1 MSMg01no450_p14.g1 CHROMAT_FILE:
MSMg01no450_p14.g1 PHD_FILE: MSMg01no450_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:04 2005
(241 letters)
>mm_chr16_6076331_6076971
Length = 641
Score = 466 bits (241), Expect = e-136
Identities = 241/241 (100%)
Strand = Plus / Minus
Query: 1 ttaagaagggatgctttattgctgttgaaggtgaagaagctgagagctccagccacctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttaagaagggatgctttattgctgttgaaggtgaagaagctgagagctccagccacctgg 243
Query: 61 gtttactctacaaagtaattctcgaggaggaaagcatcacttgggctgtggatgtagctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtttactctacaaagtaattctcgaggaggaaagcatcacttgggctgtggatgtagctc 183
Query: 121 tatcagactagttgcttacacaacatgcatagagccctaggtctctagcagtgctgcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tatcagactagttgcttacacaacatgcatagagccctaggtctctagcagtgctgcatc 123
Query: 181 aactggatgtggtggcgcacgtttaaaacgttagtgctaagaaagtggaggcaagaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aactggatgtggtggcgcacgtttaaaacgttagtgctaagaaagtggaggcaagaagat 63
Query: 241 c 241
|
Sbjct: 62 c 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
