Query= MSMg01no451_f12.b1 MSMg01no451_f12.b1 CHROMAT_FILE:
MSMg01no451_f12.b1 PHD_FILE: MSMg01no451_f12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:33 2005
(651 letters)
>mm_chr11_101665626_101666676
Length = 1051
Score = 1162 bits (601), Expect = 0.0
Identities = 638/651 (98%), Gaps = 2/651 (0%)
Strand = Plus / Plus
Query: 1 aataactactcattttgcaagagctcagcaaatagacaccaagaactatggtacagaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataactactcattttgcaagagctcagcaaatagacaccaagaactatggtacagaagc 260
Query: 61 aggatttgaggataaagtggatcaatgtatacatgtatgaatgaagccaagatggggctg 120
|| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 agaatttgaggacaaagtggatcaatgtatacttgtatgaatgaagccaagatggggctg 320
Query: 121 tgtataacacaaaccatctccctccctagatagaaagttttataaaatcacttgctagga 180
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtataacccaaaccacctccctccctagatagaaagttttataaaatcacttgctagga 380
Query: 181 gctggggctgtagctcaattggtagagtgctttcataggatgtaggaagttctgggtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctggggctgtagctcaattggtagagtgctttcataggatgtaggaagttctgggtttg 440
Query: 241 gtctacagcatggtatatatcttgtgtggtggcatacacgtgtaattgcagtcccaggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctacagcatggtatatatcttgtgtggtggcatacacgtgtaattgcagtcccaggga 500
Query: 301 aatattagataggaagatcagaaattcaacgccatccttaacgatatagagagaaaccag 360
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgttagataggaagatcagaaattcaacgccatccttaacgatatagagagaaaccag 560
Query: 361 cctgggtcgcatgacaccttgaaaaaaaaaaagataaaaaccatttgttaattataccag 420
||||||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 561 cctgggtcgcacgacagcttgaaaaaaaaa--gataaaaaccatttgttaattttaccag 618
Query: 421 gaagtctttggactgggtgtgctgtggggaggagagttggagcgttctggtctgaggatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gaagtctttggactgggtgtgctgtggggaggagagttggagcgttctggtctgaggatg 678
Query: 481 agtagagattcagttgttgatgcctgctggccagacagaggtaccactctcaggacttcc 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 agtagagattcagttgctgatgcctgctggccagacagaggtaccactctcaggacttcc 738
Query: 541 aacttctctgcagtgtgcaagtccatgatgccctgcacactgtcttaaagcctcatgtag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aacttctctgcagtgtgcaagtccatgatgccctgcacactgtcttaaagcctcatgtag 798
Query: 601 gggaacaggtcccaggcgtgagcagcacagagtcagcctgcggatcctgtt 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gggaacaggtcccaggcgtgagcagcacagagtcagcctgcggatcctgtt 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_f12.g1 MSMg01no451_f12.g1 CHROMAT_FILE:
MSMg01no451_f12.g1 PHD_FILE: MSMg01no451_f12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:33 2005
(598 letters)
>mm_chr11_101862820_101863817
Length = 998
Score = 1118 bits (578), Expect = 0.0
Identities = 593/598 (99%)
Strand = Plus / Minus
Query: 1 agttagttttgcccagtggaagtccatcgtctggggactgatgccaccaggactgaagtc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 798 agttagttttgcccagtggaagtccgtcgtctggggactgatgccaccaggactgaagtc 739
Query: 61 actgagggcgggagcccaggaggactgaactttcagaacgtgtgtgttatgataaacagg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 738 actgagggcgggagcccaggaggactgaactttcagaacgtgtgtgttgtgataaacagg 679
Query: 121 ttgcaaaatgcacatcattttctggaacactttttaggcactaagacacctgaggacccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ttgcaaaatgcacatcattttctggaacactttttaggcactaagacacctgaggacccc 619
Query: 181 tgagtttaagccctatgttatatttgtgaagcctgcaattcaggagagaaggaagacgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tgagtttaagccctatgttatatttgtgaagcctgcaattcaggagagaaggaagacgcc 559
Query: 241 gccggtgtccccagactctgaggacatagcatcttcacttgtaagttcaaagttgattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gccggtgtccccagactctgaggacatagcatcttcacttgtaagttcaaagttgattgt 499
Query: 301 ttctcctttgaaggagctgtacttagctgactctgggtgcttccaggaagagggacaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttctcctttgaaggagctgtacttagctgactctgggtgcttccaggaagagggacaggg 439
Query: 361 gccagagcttttttgtgaggccatctttcccttccttttacaagacttagaaaagaaggt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 438 gccagagcttttttgtgaggccatctttcccttccttttacaagacttagaaaagagggt 379
Query: 421 cacacagccattgtttccagggaatgggaccatgccttctgatccaagaagggtgacttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cacacagccattgtttccagggaatgggaccatgccttctgatccaagaagggtgacttt 319
Query: 481 gcttaactcagccccctctacaacctcatgttactgttcttcctaaaagggaactgaagg 540
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 318 gcttgactcagccccctctacaacctcatgttactgttcttcctaaaagggaactgtagg 259
Query: 541 ctgtcagaggctccctatgtgagtgggacaggacatgcccggctgttgaatttctgag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctgtcagaggctccctatgtgagtgggacaggacatgcccggctgttgaatttctgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
