Query= MSMg01no451_g06.b1 MSMg01no451_g06.b1 CHROMAT_FILE:
MSMg01no451_g06.b1 PHD_FILE: MSMg01no451_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:37 2005
(339 letters)
>mm_chr11_115790692_115791430
Length = 739
Score = 648 bits (335), Expect = 0.0
Identities = 338/339 (99%), Gaps = 1/339 (0%)
Strand = Plus / Plus
Query: 1 tggaactcaaaggtcagccagagctgcacagtaatacctgtctcaaaaaaaaagaaaaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 202 tggaactcaaaggtcagccagagctgcacagtaatacctgtctcaaaaaaaa-gaaaaat 260
Query: 61 agggctggagagatggctcaatgattaagagcagtaacagctcttccagaggtcctgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggctggagagatggctcaatgattaagagcagtaacagctcttccagaggtcctgagc 320
Query: 121 tcatgagcagctatatggtggctcaatgggattcgatgccctcttctggtgtgtccaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatgagcagctatatggtggctcaatgggattcgatgccctcttctggtgtgtccaaag 380
Query: 181 gcagctacagtgtacttatataaataaaataaacaattccttaaaaaggaaaagaaaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagctacagtgtacttatataaataaaataaacaattccttaaaaaggaaaagaaaaac 440
Query: 241 aacaaaacctcagtaattcaccctgactcaatacagtgatgtgcactagtggagaaatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacaaaacctcagtaattcaccctgactcaatacagtgatgtgcactagtggagaaatct 500
Query: 301 acatgtggggagtagagaaactcaatatagttacctagg 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acatgtggggagtagagaaactcaatatagttacctagg 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_g06.g1 MSMg01no451_g06.g1 CHROMAT_FILE:
MSMg01no451_g06.g1 PHD_FILE: MSMg01no451_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:37 2005
(584 letters)
>mm_chr11_115946726_115947710
Length = 985
Score = 1114 bits (576), Expect = 0.0
Identities = 582/584 (99%), Gaps = 1/584 (0%)
Strand = Plus / Minus
Query: 1 tgactctcctgacttgcactatccgggcttggattaacttgagagccaagagagacatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tgactctcctgacttgcactatccgggcttggattaacttgagagccaagagagacatga 581
Query: 61 tggaggtca-agcccacacacagtgtagacaggcacccatcttgggacttgtcacctggg 119
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tggaggtcagagcccacacccagtgtagacaggcacccatcttgggacttgtcacctggg 521
Query: 120 aagctgactcagaggagaaggtggcagtgacaaggccaggttctgctgacctcgtgtgcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aagctgactcagaggagaaggtggcagtgacaaggccaggttctgctgacctcgtgtgcg 461
Query: 180 taggtcttgggaaggggctggccagcacatgtgcctggtgaccacttctttaacctgagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 taggtcttgggaaggggctggccagcacatgtgcctggtgaccacttctttaacctgagc 401
Query: 240 tgcccctcttttattgcaccaagaaaggatatttgggacaggaggagacagctgaatgga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tgcccctcttttattgcaccaagaaaggatatttgggacaggaggagacagctgaatgga 341
Query: 300 accatacgaactcaaacctttttatcttgtaatctgagaaaccttacattgttttctggt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 accatacgaactcaaacctttttatcttgtaatctgagaaaccttacattgttttctggt 281
Query: 360 atactttgtccagttctttggctgagccaagtactctgatgccatctaatgactgtcccc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atactttgtccagttctttggctgagccaagtactctgatgccatctaatgactgtcccc 221
Query: 420 acttctaccagtctctctggtttttgaggtatggtttcattcctgtagcccaggttggcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 acttctaccagtctctctggtttttgaggtatggtttcattcctgtagcccaggttggcc 161
Query: 480 ttgaatttgaggcagtcctcctacctcaggcttttaagtgcaaggaattcaccagggctc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ttgaatttgaggcagtcctcctacctcaggcttttaagtgcaaggaattcaccagggctc 101
Query: 540 tttagtttcattatttgggagtgattcctttttgtttgtttttc 583
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tttagtttcattatttgggagtgattcctttttgtttgtttttc 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 985
Length adjustment: 10
Effective length of query: 574
Effective length of database: 975
Effective search space: 559650
Effective search space used: 559650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
