NNNNTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATTTTTGCCAAGCAAGGGCACCCAACCTGAAACTCTAAA
GACACAGGGAATGAGAAGCCCTGACCCTGCTAAATGATATATGCTGAGAC
TATTGATATTTAAACCTTTACCTGCGTTATTCCCCTTCCTGGTTTTCTTA
TTGCCCTTTTCTGTAGAAATACAACTGTAAATATAGCACTATGTTAATTA
AATATGAAAGGTACAAGTGCTTGTCCCATTTCATGTTGTCTTTTTATGAT
GAAGTATAAACTGCTGATGACTTCTAATATTCAAAAGTAAGAATCTAATA
TATCCAAGTAGTTCTGCATCTCACCTCTCGCATTTACTATCCCTTAACAC
ATGTTTGCTAGCTGGGTGGCCAGGAATTCTGTTTCTTTTCCCCTGACACA
ACTCATCTGAAAGTTCTGCTGGTGGATGCATAGCTCAGCAACCACTCTGC
TCTCCTTGTGAAGTGACTTGGTGATCTTGCAAACAGTGAGCTCTTTCCCT
TTCCCCGGTGAAGAATCAGAGATGCTGGGGTCGGGAGAAGACTTCACTAA
TATGTAGTATAGAATGGCCAGGCCCCAGTCTCCTTGAGTTTTGATGGGCT
TTGTAGAATGTAACTGGGTTCGTTTCCGAATATTCCCAAAGTTAGTTTGT
GTAATACTTTGTGAATAATGGACTCTTTAAGTAGTTTGTAGCAAAAATCA
AATATA

NNNNGGCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTATAATTCTCAAGGAC
AAGATATTGTGGAACTTTAAAACAACAGCTCATAAAAAACAAAAAAGGGG
GGGGAATTATATCCCCATACACCACATTATTTAAATTATGTCTTTTATTT
TTAAAATTTTAAAATTTGGATGCCAAAGAACTCTCTGCTAAATGTCTATG
GCATTCTACAACTAGGCATACTTATGCCTAGGTGAAATAGAAGGATCCAC
ATACTGGCATATGGCATGATCCTGATCAGGCATTTAATATGGGAAAGAAG
GCATGTTTGTGGTTTTTTTCTGCAGGATGCTGCAGGACCGTGCTACCTTC
CAGAGTGATTGGTGAGACATGCTGATGCTGGGACAAAGAATGATGCTGAC
CTGTTAGCTTGCTAAGTGCACTGACAATGGTAATGGGAAAGCTGTATTGG
ACATATGTTCTTGACCCACCTTTGCTTGCTTATATCCCAGACTGGACAAG
CTGTCTTGCTTCAAGCCTTTAGACCTTGTAGGACAGAGAACATGGAGACT
GTGGAATCTGACTTAGTAAAATTAATTGAAAGGAGAAGTTATAATAATTC
TTCTCTTTCCTTTAATGTGGCCAGNTAATCTGACTCAATCTTGGACTGGT
CTAGAAATCAATCTAATATTGGAAATACCAATGATGAAGATTGGTCAAAA
TCCCTATTAGC

Query= MSMg01no452_j10.b1 MSMg01no452_j10.b1 CHROMAT_FILE:
MSMg01no452_j10.b1 PHD_FILE: MSMg01no452_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:11 2005
         (701 letters)



>mm_chr11_24871469_24872573
          Length = 1105

 Score = 1259 bits (651), Expect = 0.0
 Identities = 687/701 (98%), Gaps = 4/701 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatttttgccaagcaagggcacccaacctgaaactctaaagacacagggaatgag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 gaattcatttttgccaagcaagggcacccaacctgaaactctaaagacacagggaatgag 846

                                                                       
Query: 65  aagccctgaccctgctaaatgatatatgctgagactattgatatttaaacctttacctgc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 aagccctgaccctgctaaatgatatatgctgagactattgatatttaaacctttacctgc 786

                                                                       
Query: 125 gttattccccttcctggttttcttattgcccttttctgtagaaatacaactgtaa----a 180
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    |
Sbjct: 785 tttattccccttcctggttttcttattgccctttcctgtagaaatacaactgtaaatata 726

                                                                       
Query: 181 tatagcactatgttaattaaatatgaaaggtacaagtgcttgtcccatttcatgttgtct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tatagcactatgttaattaaatatgaaaggtacaagtgcttgtcccatttcatgttgtct 666

                                                                       
Query: 241 ttttatgatgaagtataaactgctgatgacttctaatattcaaaagtaagaatctaatat 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 665 ttttttgatgaagtataaactgctgatgacttctaatattcaaaagtaagaatttaacat 606

                                                                       
Query: 301 atccaagtagttctgcatctcacctctcgcatttactatcccttaacacatgtttgctag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 atccaagtagttctgcatctcacctctcgcatttactatcccttaacacatgtttgctag 546

                                                                       
Query: 361 ctgggtggccaggaattctgtttcttttcccctgacacaactcatctgaaagttctgctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ctgggtggccaggaattctgtttcttttcccctgacacaactcatctgaaagttctgctg 486

                                                                       
Query: 421 gtggatgcatagctcagcaaccactctgctctccttgtgaagtgacttggtgatcttgca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gtggatgcatagctcagcaaccactctgctctccttgtgaagtgacttggtgatcttgca 426

                                                                       
Query: 481 aacagtgagctctttccctttccccggtgaagaatcagagatgctggggtcgggagaaga 540
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 425 aacagtgagctctttccctttccccggtgaagaatcagagatgctggggttgggagaaga 366

                                                                       
Query: 541 cttcactaatatgtagtatagaatggccaggccccagtctccttgagttttgatgggctt 600
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cttcaccaatatgtagtatagaatggccaggccccagtctccttgagttttgatgggctt 306

                                                                       
Query: 601 tgtagaatgtaactgggttcgtttccgaatattcccaaagttagtttgtgtaatactttg 660
           ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 305 tgtagaatgtaactgggttcgtttcctcatattcccaaagttagtttgtgtaatactttg 246

                                                    
Query: 661 tgaataatggactctttaagtagtttgtagcaaaaatcaaa 701
           ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 245 tgaataagggactctttaagtagtttgtagcaaaaatcaaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1105
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1095
Effective search space:   756645
Effective search space used:   756645
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)