MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-452K17
Chromosome	11 (Build37)
Map Location	107,210,670 - 107,211,248
singlet/doublet	singlet
Overlap gene	Pitpnc1
Upstream gene	Scn4a, 2310007L24Rik, Icam2, Ern1, LOC100041277, Tex2, Pecam1, Gm885, Polg2, Ddx5, Ccdc45, Smurf2, LOC666873, Kpna2, 1810010H24Rik, Bptf, LOC100042899, Nol11, LOC671692
Downstream gene	Psmd12, A830035A12Rik, Helz, Cacng1, Cacng4, Cacng5, Prkca
Link	Open Mouse BAC browser

Click to get alignment info.

name	Scn4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110880 MGI:98250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310007L24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75573 MGI:1922823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Icam2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15896 MGI:96394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ern1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78943 MGI:1930134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041277 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Tex2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21763 MGI:102465
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pecam1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18613 MGI:97537
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gm885 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380732 MGI:2685731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Polg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50776 MGI:1354947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddx5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13207 MGI:105037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc45 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320162 MGI:2443502
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smurf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66313 MGI:1913563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666873 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Kpna2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16647 MGI:103561
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810010H24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69066 MGI:1916316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 2 Proteins

name	Bptf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207165 MGI:2444008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042899 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042899
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	Nol11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68979 MGI:1916229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671692 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671692
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Pitpnc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71795 MGI:1919045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Psmd12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66997 MGI:1914247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A830035A12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:442842 MGI:3045382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Helz (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78455 MGI:1925705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cacng1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12299 MGI:1206582
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cacng4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54377 MGI:1859167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cacng5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140723 MGI:2157946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18750 MGI:97595
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scn4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134948031 GeneID:110880 MGI:98250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type IV, alpha transcript_id : NM_133199.2

name	2310007L24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94391030 GeneID:75573 MGI:1922823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 2310007L24 gene, transcript variant 1 transcript_id : XM_126508.5

name	Icam2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754273 GeneID:15896 MGI:96394
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : intercellular adhesion molecule 2 transcript_id : NM_010494.1

name	Ern1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15284149 GeneID:78943 MGI:1930134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endoplasmic reticulum (ER) to nucleus signalling 1 transcript_id : NM_023913.2

name	LOC100041277 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262465 GeneID:100041277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100041277 transcript_id : XM_001476085.1

name	Tex2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51988885 GeneID:21763 MGI:102465
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis expressed gene 2 transcript_id : NM_198292.3

name	Pecam1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:74024914 GeneID:18613 MGI:97537
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet/endothelial cell adhesion molecule 1 transcript_id : NM_001032378.1

name	Pecam1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:74024906 GeneID:18613 MGI:97537
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet/endothelial cell adhesion molecule 1 transcript_id : NM_008816.2

name	Gm885 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803484 GeneID:380732 MGI:2685731
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 885, (NCBI) transcript_id : NM_001033435.2

name	Polg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7657466 GeneID:50776 MGI:1354947
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA directed), gamma 2, accessory subunit transcript_id : NM_015810.1

name	Ddx5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378584 GeneID:13207 MGI:105037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 transcript_id : NM_007840.3

name	Ccdc45 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351923 GeneID:320162 MGI:2443502
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 45 transcript_id : NM_177088.2

name	Smurf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57977276 GeneID:66313 MGI:1913563
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SMAD specific E3 ubiquitin protein ligase 2 transcript_id : NM_025481.1

name	Kpna2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83281453 GeneID:16647 MGI:103561
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : karyopherin (importin) alpha 2 transcript_id : NM_010655.3

name	1810010H24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262547 GeneID:69066 MGI:1916316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 2 Proteins product : RIKEN cDNA 1810010H24 gene transcript_id : XM_286373.6

name	Bptf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:140969816 GeneID:207165 MGI:2444008
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain PHD finger transcription factor transcript_id : NM_176850.2

name	Nol11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526871 GeneID:68979 MGI:1916229
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar protein 11 transcript_id : NM_133702.1

name	Pitpnc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84490397 GeneID:71795 MGI:1919045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol transfer protein, cytoplasmic 1 transcript_id : NM_145823.2

name	Psmd12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802643 GeneID:66997 MGI:1914247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 transcript_id : NM_025894.2

name	A830035A12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390904 GeneID:442842 MGI:3045382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA A830035A12 gene transcript_id : XM_986896.1

name	Helz (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50355942 GeneID:78455 MGI:1925705
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : helicase with zinc finger domain transcript_id : NM_198298.1

name	Cacng1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70778905 GeneID:12299 MGI:1206582
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, gamma subunit 1 transcript_id : NM_007582.2

name	Cacng4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130751 GeneID:54377 MGI:1859167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, gamma subunit 4 transcript_id : NM_019431.2

name	Cacng5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370454 GeneID:140723 MGI:2157946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, gamma subunit 5 transcript_id : NM_080644.3

name	Prkca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364622 GeneID:18750 MGI:97595
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, alpha transcript_id : NM_011101.2

name	Scn4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134948032 GeneID:110880 MGI:98250
definition	GO_function : GO:0005216 - ion channel activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium channel alpha-subunit; sodium channel, voltage-gated, type IV, alpha polypeptide product : sodium channel, voltage-gated, type IV, alpha protein_id : NP_573462.2

name	2310007L24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82935295 GeneID:75573 MGI:1922823
definition	codon_start : 1 product : hypothetical protein LOC75573 isoform 1 protein_id : XP_126508.3

name	Icam2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754274 CCDS:CCDS25555.1 GeneID:15896 MGI:96394
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0001931 - uropod [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IEA] codon_start : 1 product : intercellular adhesion molecule 2 protein_id : NP_034624.1

name	Ern1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13249351 CCDS:CCDS25556.1 GeneID:78943 MGI:1930134
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005789 - endoplasmic reticulum membrane [Evidence IDA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IEP]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence ISS] [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0004521 - endoribonuclease activity [Evidence IDA]; GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence ISS] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IDA]; GO:0006118 - electron transport [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IDA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence ISS] [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006950 - response to stress [Evidence ISS]; GO:0006986 - response to unfolded protein [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA]; GO:0006987 - unfolded protein response, activation of signaling protein activity [Evidence ISS] codon_start : 1 product : inositol-requiring 1 alpha protein_id : NP_076402.1

name	LOC100041277 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262466 GeneID:100041277
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476135.1

name	Tex2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46430497 CCDS:CCDS25557.1 GeneID:21763 MGI:102465
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : testis expressed gene 2 protein_id : NP_938034.2

name	Pecam1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74024915 CCDS:CCDS25558.1 GeneID:18613 MGI:97537
definition	GO_component : GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0030334 - regulation of cell migration [Evidence IMP]; GO:0007266 - Rho protein signal transduction [Evidence IMP]; GO:0042060 - wound healing [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; PECAM-1/CD31 product : platelet/endothelial cell adhesion molecule 1 isoform 2 protein_id : NP_001027550.1

name	Pecam1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74024907 CCDS:CCDS25559.1 GeneID:18613 MGI:97537
definition	GO_component : GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0030334 - regulation of cell migration [Evidence IMP]; GO:0007266 - Rho protein signal transduction [Evidence IMP]; GO:0042060 - wound healing [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; PECAM-1/CD31 product : platelet/endothelial cell adhesion molecule 1 isoform 1 protein_id : NP_032842.2

name	Gm885 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701947 CCDS:CCDS25560.1 GeneID:380732 MGI:2685731
definition	codon_start : 1 product : hypothetical protein LOC380732 protein_id : NP_001028607.1

name	Polg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657467 CCDS:CCDS25561.1 GeneID:50776 MGI:1354947
definition	GO_component : GO:0005739 - mitochondrion [Evidence TAS] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003895 - gamma DNA-directed DNA polymerase activity [Evidence ISS] [Evidence IDA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence TAS]; GO:0006260 - DNA replication [Evidence TAS]; GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : mitochondrial polymerase gamma 2; polymerase, gamma 2 product : polymerase (DNA directed), gamma 2, accessory subunit protein_id : NP_056625.1

name	Ddx5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83816893 CCDS:CCDS25562.1 GeneID:13207 MGI:105037
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]; GO:0003712 - transcription cofactor activity [Evidence IDA] GO_process : GO:0045941 - positive regulation of transcription [Evidence IDA] codon_start : 1 note : D-E-A-D (aspartate-glutamate-alanine-aspartate) box polypeptide 5; DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 5; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5; p68 RNA helicase product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 protein_id : NP_031866.2

name	Ccdc45 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893009 CCDS:CCDS25563.1 GeneID:320162 MGI:2443502
definition	codon_start : 1 exception : mismatches in translation product : coiled-coil domain containing 45 protein_id : NP_796062.1

name	Smurf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:57977277 CCDS:CCDS25564.1 GeneID:66313 MGI:1913563
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : novel protein similar to human E3 ubiquitin ligase SMURF2 product : SMAD specific E3 ubiquitin protein ligase 2 protein_id : NP_079757.1

name	Kpna2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754474 CCDS:CCDS25565.1 GeneID:16647 MGI:103561
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008565 - protein transporter activity [Evidence IDA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006606 - protein import into nucleus [Evidence IDA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : importin alpha; pendulin; m-importin-alpha-P1 product : karyopherin (importin) alpha 2 protein_id : NP_034785.1

name	1810010H24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262548 GeneID:69066 MGI:1916316
definition	codon_start : 1 product : hypothetical protein LOC69066 protein_id : XP_286373.6

name	Bptf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:140969817 GeneID:207165 MGI:2444008
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0008094 - DNA-dependent ATPase activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence ISS]; GO:0008134 - transcription factor binding [Evidence ISS]; GO:0030528 - transcription regulator activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007420 - brain development [Evidence ISS]; GO:0006338 - chromatin remodeling [Evidence ISS]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : fetal Alzheimer antigen product : bromodomain PHD finger transcription factor protein_id : NP_789820.2

name	Nol11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526872 CCDS:CCDS25566.1 GeneID:68979 MGI:1916229
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : nucleolar protein 11 protein_id : NP_598463.1

name	Pitpnc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003862 CCDS:CCDS25567.1 GeneID:71795 MGI:1919045
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005545 - phosphatidylinositol binding [Evidence IC]; GO:0008526 - phosphatidylinositol transporter activity [Evidence ISS] GO_process : GO:0046488 - phosphatidylinositol metabolism [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : diabetic nephropathy-related protein product : retinal degeneration B beta protein_id : NP_665822.1

name	Psmd12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385384 CCDS:CCDS25568.1 GeneID:66997 MGI:1914247
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] codon_start : 1 product : proteasome 26S non-ATPase subunit 12 protein_id : NP_080170.1

name	A830035A12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94390905 GeneID:442842 MGI:3045382
definition	codon_start : 1 product : hypothetical protein protein_id : XP_991990.1

name	Helz (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50355943 CCDS:CCDS25569.1 GeneID:78455 MGI:1925705
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : helicase with zinc finger domain protein_id : NP_938040.1

name	Cacng1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671658 CCDS:CCDS25570.1 GeneID:12299 MGI:1206582
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : dihydropyridine receptor gamma 1 product : voltage-dependent calcium channel gamma-1 subunit protein_id : NP_031608.1

name	Cacng4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506455 CCDS:CCDS25571.1 GeneID:54377 MGI:1859167
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0019226 - transmission of nerve impulse [Evidence IGI]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : voltage-dependent calcium channel gamma-4 subunit protein_id : NP_062304.1

name	Cacng5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21687006 CCDS:CCDS25572.1 GeneID:140723 MGI:2157946
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : voltage dependent calcium channel gamma 5 subunit product : voltage-dependent calcium channel gamma-5 subunit protein_id : NP_542375.1

name	Prkca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755078 CCDS:CCDS25573.1 GeneID:18750 MGI:97595
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004698 - calcium-dependent protein kinase C activity [Evidence IDA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004697 - protein kinase C activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence IMP]; GO:0002026 - cardiac inotropy [Evidence IMP]; GO:0000188 - inactivation of MAPK activity [Evidence IMP]; GO:0008629 - induction of apoptosis by intracellular signals [Evidence IMP]; GO:0050930 - induction of positive chemotaxis [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0046325 - negative regulation of glucose import [Evidence IMP]; GO:0046627 - negative regulation of insulin receptor signaling pathway [Evidence IMP]; GO:0001933 - negative regulation of protein amino acid phosphorylation [Evidence IMP]; GO:0006469 - negative regulation of protein kinase activity [Evidence IMP]; GO:0030593 - neutrophil chemotaxis [Evidence IMP]; GO:0050729 - positive regulation of inflammatory response [Evidence IMP]; GO:0001934 - positive regulation of protein amino acid phosphorylation [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006937 - regulation of muscle contraction [Evidence IMP]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IMP] codon_start : 1 exception : mismatches in translation note : protein kinase c-alpha product : protein kinase C, alpha protein_id : NP_035231.1

name	LOC666873 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666873
definition	number : 1 pseudo : _no_value

name	LOC666873 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666873
definition	number : 2 pseudo : _no_value

name	LOC671692 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671692
definition	number : 1 pseudo : _no_value

name	LOC671692 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671692
definition	number : 2 pseudo : _no_value

name	LOC671692 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671692
definition	number : 3 pseudo : _no_value

name	LOC100042899 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262549 GeneID:100042899
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to Rpl30 protein pseudo : _no_value transcript_id : XR_034459.1

clone name	MSMg01-530L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304K18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-498N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-299D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-452K17.T7 (MSMg01no452_k17.b1)	MSMg01-452K17.TJ (MSMg01no452_k17.g1)
ACC	AG539867	AG539868
length	744	741
length of high quality (start - end)	491 (77 - 567)	596 (76 - 671)
definition	CHROMAT_FILE: MSMg01no452_k17.b1 PHD_FILE: MSMg01no452_k17.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:23:18 2005	CHROMAT_FILE: MSMg01no452_k17.g1 PHD_FILE: MSMg01no452_k17.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:23:18 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NAAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC GCGGAATTCCAGGATTTTCCCGACTACAGAGAAAACCCTGTCTCAAAAAT CCAAAGCCACACTAACACACGCATACATCTAAACACGTATATATACATGT TGTGCTGGCTGGTTTTGTGTGTCAACTTGACACAAGCTGGAGTTATCACA GAGAAAGGAACATCAGGTGAGGAAATGCTTCCATGAGATCAAACCATAAG GCATTTTCTCAATTAGTGATCAAGGGGGGAGGGCCCATTGTGGGTGGTGC CATCCCTGGGGCTGGTAGTCTTGGGTTCTATAAGCAAGCAAGCTGAGCAA TCCAGTAACTAACATCCCTCCATGGCCTCTGCGTCAGCTCCTGCTTCCTG CCCTTTCTCCTCAGCTTGTTTCTTGTTCATGATGTTTGTTCAGGAATAGA AACCCTGACTAAGTCTGGCGGTGGTGGCGCACGCCTTTAATCTCAGCACT CAGGAGGCAGAGGCAGGTGGATTCTGAGTTCGAGGTCAGCCTGGTCTACA GAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCCTGGAT ATACTTTTCTAAAACATTTACAATAACGATAAAGAGACTCCGACTAATAC ACTTATATGCCCAAACATACACACATACTTGTATATAGTTCACCCCTGGG CTACATTTTTGTTCAAAATAGTCAAGTAGTAATGAATAAATATG	NCACCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXTGTATCACTCTTTTCTGTGTGTCTG TGTGGTGCACGTGCACACTTGCGACTGGGTGAGTGTGTTCCTCGGGTGCT TTCTTGGGAGATGGATTGGCTCCCGAGCCTTCGGAGTCTACAGCCTTCGC TTCCCCAGTACTGGAGTGTGTATAGGCGTGTCCTGACTGCCATGCCAAAC TTTACATGAGTCGGGGAGCCTGAACTCAAGCACATACTTTACCCAGAGTC ATCTTCCAGGACCCGGCATCACTTACAAACCAAACCCAAAACAAATCACT TAACACAAGTACTCCATACATGTTAGACCCCACAGACAATGGAGGCACGG TGATGAACAGCAGTCTCCGTGTTGGTCAAAGATGAGTTTCCTGAGGGATT CTGCCTTGAAGACAACACTAGCAACCCAGCTAACGAATCCTGACATATCA TGGGGCTTCTCCAGTGGTTCTCGGCAAATGTGAAGTGGATGCTGACTCAA GTAAATGAAGGGCCTGATGCAGGCTTGACCTTCAGCAAGCAAATGAGGTG CTTGCATTGGCTATGGAAGAAAGGCGCACAGCCAATCCCAAGACGAGATG GGACCTGCGCCGTTAACTTGTGCCTGCATTGTCAGTGTTCATCTTCGTAC CTCAGCCTGCTATCAAGTGTTCCCAAGGGAGAGACCCTCAC
quality values	Open. Hide. 0 3 6 6 6 6 10 10 10 10 18 19 18 30 22 25 25 34 26 12 13 9 9 9 13 18 30 30 37 28 20 20 17 19 8 6 6 6 6 6 6 9 9 9 11 11 11 13 13 13 15 27 28 33 33 33 33 33 33 33 19 15 10 11 11 16 19 15 10 9 8 8 8 11 10 15 19 19 22 29 37 37 33 36 53 53 53 53 59 57 57 42 37 40 40 40 50 50 50 50 50 48 48 54 54 54 54 54 48 48 48 48 53 54 68 54 54 48 47 47 47 48 46 46 47 41 41 57 57 57 68 68 68 57 57 68 68 59 59 59 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 57 59 68 68 68 59 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 57 57 57 57 68 68 68 68 68 57 59 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 57 59 57 54 54 57 57 57 57 47 57 57 68 68 68 68 68 68 59 59 59 68 68 68 68 57 57 68 59 57 57 57 57 57 47 47 35 35 44 44 46 57 48 48 48 48 48 48 48 59 59 54 54 54 59 48 48 48 48 48 59 59 46 46 46 57 57 57 57 57 57 57 59 48 48 59 59 59 59 59 25 25 11 11 11 12 12 27 28 47 50 27 27 21 13 13 13 13 34 30 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 59 59 59 59 59 59 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 59 59 54 54 48 59 59 57 57 57 57 57 57 57 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 59 59 59 59 59 57 57 57 43 43 29 43 43 44 44 52 47 50 50 50 50 50 57 52 52 52 44 44 43 43 57 50 44 50 43 43 43 43 43 48 50 57 57 57 43 43 43 44 44 57 57 59 57 57 57 47 47 54 57 44 57 48 48 57 57 44 34 26 13 13 18 24 32 37 44 37 28 28 32 32 39 37 32 32 32 32 43 43 48 48 54 43 43 43 43 47 47 37 30 25 33 24 28 25 28 28 39 43 43 39 39 25 19 20 22 24 30 34 39 47 34 34 34 28 24 27 34 37 34 32 20 18 15 18 15 26 23 28 20 20 15 18 9 11 12 22 10 11 11 16 19 13 21 21 16 12 10 8 8 6 7 11 14 13 12 9 6 6 7 8 8 13 8 8 9 9 9 9 17 13 10 8 8 8 8 10 10 8 8 7 11 9 9 9 9 11 12 12 11 10 10 8 8 8 10 10 10 9 9 11 13 10 10 9 9 10 11 11 12 12 11 11 9 9 9 9 10 10 19 19 15 17 10 9 9 9 9 9 13 15 22 23 21 19 15 11 18 11 11 11 11 11 11 11 11 9 9 9 8 8 8 9 8 8 8 8 7 7 9 9 8 8 8 8 8 8 10 9 9 9 9 14 8 8 7 6 6 6 8 6 6 8 6 8 8 8 8 8 8 10 9 9 9 12 8 8 8 8 8 6 6	Open. Hide. 0 3 6 6 8 8 12 10 9 9 8 8 8 7 6 8 9 13 27 37 43 37 37 37 37 37 31 31 41 27 18 18 9 9 9 9 9 9 7 7 7 10 10 10 10 8 10 22 23 12 11 11 21 21 50 42 37 27 20 8 6 6 6 7 13 11 11 11 23 15 17 17 18 18 20 37 37 37 30 33 33 36 36 36 59 59 59 59 59 59 59 59 59 57 53 53 53 53 53 57 68 68 68 68 68 68 68 68 68 68 68 54 50 50 48 48 48 48 50 57 57 48 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 48 42 41 41 41 48 57 68 68 68 68 68 68 68 68 50 50 50 50 51 68 68 68 68 50 50 51 50 50 68 57 57 57 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 68 62 62 62 52 52 52 52 52 52 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 44 44 43 39 39 57 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 57 57 57 57 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 59 59 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 59 59 57 57 59 59 59 59 57 48 48 48 57 57 57 57 57 59 59 68 68 68 68 68 68 54 57 57 57 57 59 59 59 57 57 57 68 68 68 59 59 59 57 57 57 57 57 48 48 48 57 59 57 57 57 57 57 57 48 53 48 48 41 41 41 41 39 39 39 36 32 41 43 59 59 59 59 59 48 48 48 48 48 48 59 59 59 47 47 41 41 39 26 26 25 24 24 28 43 44 41 39 41 41 37 32 39 43 37 37 32 31 31 32 37 47 47 47 47 59 48 43 41 39 36 39 39 39 39 31 34 39 37 37 37 41 41 39 47 44 44 41 28 32 20 24 24 34 25 27 28 37 31 35 34 29 26 32 36 37 39 37 37 35 31 25 25 25 39 34 30 22 22 22 30 30 36 39 37 37 32 37 32 30 34 38 34 37 41 39 39 38 32 30 30 30 27 24 23 32 28 25 12 12 12 22 23 30 19 12 10 10 17 15 15 12 12 12 13 16 17 18 19 37 37 39 39 37 37 37 37 33 37 39 34 31 25 18 16 11 12 10 12 10 15 15 19 17 20 19 17 15 18 16 11 11 13 13 15 15 28 34 37 37 37 35 32 31 26 20 19 12 12 12

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no452_k17.g1 MSMg01no452_k17.g1 CHROMAT_FILE:
MSMg01no452_k17.g1 PHD_FILE: MSMg01no452_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:18 2005
         (596 letters)



>mm_chr11_107210470_107211467
          Length = 998

 Score = 1085 bits (561), Expect = 0.0
 Identities = 574/579 (99%), Gaps = 2/579 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtatcactcttttc--tgtgtgtctgtgtggtgcacgtgcacacttgcgactgggtgag 58
           |||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 tgtatcactcttttctatgtgtgtctgtgtggtgcacatgcacacttgcgactgggtgag 260

                                                                       
Query: 59  tgtgttcctcgggtgctttcttgggagatggattggctcccgagccttcggagtctacag 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgttcctcgggtgctttcttgggagatggattggctcccgagccttcggagtctacag 320

                                                                       
Query: 119 ccttcgcttccccagtactggagtgtgtataggcgtgtcctgactgccatgccaaacttt 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttcgcttccccagtactggagtgtgtataggcgtgtcctgactgccatgccaaacttt 380

                                                                       
Query: 179 acatgagtcggggagcctgaactcaagcacatactttacccagagtcatcttccaggacc 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatgagtcggggagcctgaactcaagcacatactttacccagagtcatcttccaggacc 440

                                                                       
Query: 239 cggcatcacttacaaaccaaacccaaaacaaatcacttaacacaagtactccatacatgt 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cggcatcacttacaaaccaaacccaaaacaaatcacttaacacaagtactccatacatgt 500

                                                                       
Query: 299 tagaccccacagacaatggaggcacggtgatgaacagcagtctccgtgttggtcaaagat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagaccccacagacaatggaggcacggtgatgaacagcagtctccgtgttggtcaaagat 560

                                                                       
Query: 359 gagtttcctgagggattctgccttgaagacaacactagcaacccagctaacgaatcctga 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagtttcctgagggattctgccttgaagacaacactagcaacccagctaacgaatcctga 620

                                                                       
Query: 419 catatcatggggcttctccagtggttctcggcaaatgtgaagtggatgctgactcaagta 478
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catatcatgggacttctccagtggttctcggcaaatgtgaagtggatgctgactcaagta 680

                                                                       
Query: 479 aatgaagggcctgatgcaggcttgaccttcagcaagcaaatgaggtgcttgcattggcta 538
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 aatgaagggcctgatgcaggcttgaccttcagcaagcaaatgagttgcttgcattggcta 740

                                                  
Query: 539 tggaagaaaggcgcacagccaatcccaagacgagatggg 577
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggaagaaaggcgcacagccaatcccaagacgagatggg 779


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 998
Length adjustment: 10
Effective length of query: 586
Effective length of database: 988
Effective search space:   578968
Effective search space used:   578968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information