CGTTCCACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCGAGG
ATCCGCGGAATTCATTACTTTTTCTGTAACATTTTATATGAATTTATTAC
TTAATTAGTTTTTACCTTATGTGACAGGGGTTATTGAATGAACCTTACAT
TTCCATAAAGCCAGAACAAAAATCTAAGTAATCTTTTATAGGGTCTCCTA
TTAAAATGCAGTCAAGACCAACACAAAAATGTATTTACATACCTCAGAGA
ATTTTTAATTTGTCACATCTTTCAAGCAGTTGGGAAGATGTGTATTGAAG
AAGTGATTTATTTCCTATGAGAAAACAAAACCACTCAAAAAAAAAAAACA
AAAAAACAAAAAACAAAAAAGAAAATAATTATTTCTACATGATTGCAAAT
AGTTGACACCTACACAATGCTGTGTTAAATTGTACTGAATCTGAAAGAAT
TTTAGAATCGTTAATGTGTTAACTTTTCTGAAGAATTTCAGAGATTTAAA
AACTATTCTGGCCTTCTAGTTTCCGTCTATGCCCAGAGCTGATCCCGTGT
CACAGCACTGCATGACCCAAATACTGCTGGGAGAAAGCTATTCTCCAAGG
AGTACTGGCACACCTGTGAGCACAGGTAAGACCACCACTTCTGCTCCGAA
GAACCCACCAGAGACCTCCGGACACAGGAACCAAGGAGAAGCCTGTGACA
AGATCCTTCCGATTTCCATATGTGCCCCAGAGCTGACCCTGTAC

CCCGCACACTAGCGAGTCGCTCTTGTTTCCCGACGACACTGAGCACCCCT
CATACTCGATTTCTCCATTGAACACACCCCCGAACATAAACCCGGGAGAA
GTGGGGTGGGGTGCTTCTTTTTTTTTATTNTCCTCCCGCGGAAAAGGAAA
CAAAATTGGGGGGTTTAAGGGTCACCCGTGTAGGTCGGGGGACCCCGACC
CCCCTGGAGGTCCTCGTTCCCCGCAAAACACAATGTTGTAAAGGGGGTTG
GGAAAACCACCCTTTAAAATAAAGGGNAAAAAGGGGTTAATTTTCCCCCC
CCCCCGGGGGGGAAAAAAAATATTCCCCCCAACCCCTGGTGTTTAAACCA
CAATTTAACCCCCCTTCTCCAAAAAAAAAAAAAAGGGGTCTTTTGGGGGG
TTTCTTGGGGGTTTTTTTAAAACCAGGGGGGGAGAAAAGAGAAATAGTGG
AAAAAATGGGGGCCCCAAACCCCGGTGGGGGAAAGAAAAAAAAAATTTTG
TGGGGGGGATAAAGGGGGGGGGGGAAAAAAAAATTGGGGGGGGGGGGGAA
GGGTTTTTTCCCCCCCCCCCGGGGAGAAAAAACCACCCCTTTTAAAAAAT
ATACATATTTTATAAAAGGGGGGGAAATTTTTTTTTCCCCCCCCCCCCCG
GGGAAAAACCCGGCGGGGGGGGGGGGGGGGAAAAAAACCCCCCTCAGAGA
AAAAATATTTCTTTTTTAAAAAAAAAAAAAAAGGGGGGGGGGGGGAGCCC
CCCCTCCTTAAAAAACAACCACCGCGGGGGGGGGGGAGAAAATTCTTCGC
CCCTCTTTTCTCCCTAACAGAAGAAAAAAAACACACATCTCAGCGGGGGG
TGAGAACCACCGTCTTATTAGCAACACCAAACAAAACCTAAAATTGGATG
GGAGGGTGAGAGAACAAAACACCCACCCTCTC

Query= MSMg01no453_i05.b1 MSMg01no453_i05.b1 CHROMAT_FILE:
MSMg01no453_i05.b1 PHD_FILE: MSMg01no453_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:25 2005
         (578 letters)



>mm_chr11_10118592_10119569
          Length = 978

 Score = 1006 bits (520), Expect = 0.0
 Identities = 544/558 (97%), Gaps = 11/558 (1%)
 Strand = Plus / Minus

                                                                       
Query: 17  gaattcattactttttctgtaacattttatatgaatttattacttaattagtttttacct 76
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 gaattcattagtttttctgtaacattttatatgaatttattacttaattagtttttacct 918

                                                                       
Query: 77  tatgtgacaggggttattgaatgaaccttacatttccataaagccagaacaaaaatctaa 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 tatgtgacaggggttattgaatgaaccttacatttccataaagccagaacaaaaatctaa 858

                                                                       
Query: 137 gtaatcttttatagggtctcctattaaaatgcagtcaagaccaacacaaaaatgtattta 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gtaatcttttatagggtctcctattaaaatgcagtcaagaccaacacaaaaatgtattta 798

                                                                       
Query: 197 catacctcagagaatttttaatttgtcacatctttcaagcagttgggaagatgtgtattg 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 catacctcagagaatttttaatttgtcacatctttcaagcagttgggaagatgtgtattg 738

                                                                       
Query: 257 aagaagtgatttatttcctatgagaaaacaaaaccactcaaaaaaaaaaaacaaaaaaac 316
           |||||||||||||||||||||||||||||||||||||||||||||||||||     ||||
Sbjct: 737 aagaagtgatttatttcctatgagaaaacaaaaccactcaaaaaaaaaaaa-----aaac 683

                                                                       
Query: 317 aaaaaacaaaaaagaaaataattatttctacatgattgcaaatagttgacacctacacaa 376
           ||||||||||||      ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aaaaaacaaaaa------taattatttctacatgattgcaaatagttgacacctacacaa 629

                                                                       
Query: 377 tgctgtgttaaattgtactgaatctgaaagaattttagaatcgttaatgtgttaactttt 436
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tgccgtgttaaattgtactgaatctgaaagaattttagaatcgttaatgtgttaactttt 569

                                                                       
Query: 437 ctgaagaatttcagagatttaaaaactattctggccttctagtttccgtctatgcccaga 496
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 568 ctgaagaatttcagagatttaaaaactattctggccttccagtttccgtctatgcccaga 509

                                                                       
Query: 497 gctgatcccgtgtcacagcactgcatgacccaaatactgctgggagaaagctattctcca 556
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gctgatcccgtgtcacagcactgcatgacccaaatactgctgggagaaagctattctcca 449

                             
Query: 557 aggagtactggcacacct 574
           ||||||||||||||||||
Sbjct: 448 aggagtactggcacacct 431


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space:   549824
Effective search space used:   549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)