Query= MSMg01no453_m15.b1 MSMg01no453_m15.b1 CHROMAT_FILE:
MSMg01no453_m15.b1 PHD_FILE: MSMg01no453_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:46 2005
(627 letters)
>mm_chr11_51744869_51745895
Length = 1027
Score = 1062 bits (549), Expect = 0.0
Identities = 597/613 (97%), Gaps = 2/613 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactatgtaaactcacagaaatccacttgcctctgcctccccagtgatgagatt 63
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 204 ggaattcactatgtaaactcacagaaatccacctgcctctgcctctccagtgatgagatt 263
Query: 64 aaaggtgcacacaccacacccagcctcctcccctcttcctctttttagtatattttaatt 123
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaaggtgcgcacaccacacccagcctcctcccctcttcctctttttagtatattttaatt 323
Query: 124 aatccattgagaatttcatatagtgtattattatcatagtcaccctaactacttcctcca 183
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 324 aatccgttgagaatttcatatagtgtattattatcatagtcaccctaactccttcctcca 383
Query: 184 cactcccaccccaccccaccccctactttgtatctgctattttaaaataatccactgaat 243
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 384 cactcccaccccaccccacccccaactttgtatccgctattttaaaataatccactgagt 443
Query: 244 ccagtttgtgctgcctggatcgtcctc-gtgtggggcatcctcgtctggagtgtgcagga 302
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 444 ccagtttgtgctgcctggatcgtcctccgtgtggggcatcctcgtctggagtgtgcagga 503
Query: 303 cgtagtaggcgaccacatcctcaaagaaaactgacacttcctccctcagaagccacagcc 362
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cgcagtaggcaaccacatcctcaaagaaaactgacacttcctccctcagaagccacagcc 563
Query: 363 attacttcatgcttaggggtggggacttgtgatcctcttcctcctctgtgctaaagagtc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attacttcatgcttaggggtggggacttgtgatcctcttcctcctctgtgctaaagagtc 623
Query: 423 actgacttgaccttgtgtagggattacataaccacagcttctccaagttcacgagtgcct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 actgacttgaccttgtgtagggattacataaccacagcttctccaagttcacgagtgcct 683
Query: 483 tgcctttttccccttcacatttcttctagtggggaggggaggtgtgggaaaccacatgtg 542
||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||
Sbjct: 684 tgcctttttccccttcacatttcttctaggggggaggggaggtgtgggaagctacatgtg 743
Query: 543 ccgttgcagggtggcgctggcttccgctggccaccacgcatacataggcagtaaagtttt 602
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ccgttgcaaggtggcgctggcttccgctggccaccacgcatacataggcagtaaagtttt 803
Query: 603 ttttt-ttttttt 614
||||| |||||||
Sbjct: 804 tttttgttttttt 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_m15.g1 MSMg01no453_m15.g1 CHROMAT_FILE:
MSMg01no453_m15.g1 PHD_FILE: MSMg01no453_m15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:46 2005
(487 letters)
>mm_chr11_51941861_51942751
Length = 891
Score = 915 bits (473), Expect = 0.0
Identities = 484/489 (98%), Gaps = 4/489 (0%)
Strand = Plus / Minus
Query: 3 agcttacctctgccacatagtgagtctcagcacagctggtatgaccatccaaaaagaaca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 agcttacctctgccacatagtgagtctcagcacagctggtatgaccatccaaaaagaaca 632
Query: 63 acagatggggattcaaagcaaccttccagcttccagcagctcagactggagactgagaac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 acagatggggattcaaagcaaccttccagcttccagcagctcagactggagactgagaac 572
Query: 123 tactacttaatgaggctggggatggggaaacacacattcatgactgtgcatgagaagaga 182
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tactacttaatgaggttggggatggggaaacacacattcatgactgtgcatgagaagaga 512
Query: 183 cacccagagactgactgtcttatgaagacgggtgagaaaagtacatcagccatgggccta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cacccagagactgactgtcttatgaagacgggtgagaaaagtacatcagccatgggccta 452
Query: 243 cagagcccacagagtcagcgaaagagacactggagacgaaacaagcagaggatgcag--g 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 451 cagagcccacagagtcagcgaaagagacactggagacgaaacaagcagaggatgcagcag 392
Query: 301 ccaggagcagcagcagccgtccatctggctacactgggagctg--gactgttgtttcttg 358
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 391 ccaggagcagcagcagccgtccatctggctacactgggagctgtagactgttgtttcttg 332
Query: 359 gtgtaaaagcagagtgcagcaatgaggatcacaaggtcaattcactcttgctgcacactg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtgtaaaagcagagtgcagcaatgaggatcacaaggtcaattcactcttgctgcacactg 272
Query: 419 agacgacagagaccctgaattccatgcacaatcacagaatacagtgggaggggctgcaga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agacgacagagaccctgaattccatgcacaatcacagaatacagtgggaggggctgcaga 212
Query: 479 gatggctga 487
|||||||||
Sbjct: 211 gatggctga 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 891
Length adjustment: 10
Effective length of query: 477
Effective length of database: 881
Effective search space: 420237
Effective search space used: 420237
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
